Protein–RNA interactions for Protein: Q99PM3

Gtf2a1, Transcription initiation factor IIA subunit 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1Q99PM3 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gtf2a1Q99PM3 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gtf2a1Q99PM3 Palld-201ENSMUST00000034057 3566 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Gtf2a1Q99PM3 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Gtf2a1Q99PM3 Tsix-202ENSMUST00000211291 3263 ntTSL 5 BASIC13.38□□□□□ -0.27
Gtf2a1Q99PM3 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gtf2a1Q99PM3 Elovl5-201ENSMUST00000034904 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gtf2a1Q99PM3 Speer4b-201ENSMUST00000053257 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gtf2a1Q99PM3 Cacna2d1-204ENSMUST00000115281 3412 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Gtf2a1Q99PM3 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gtf2a1Q99PM3 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Gtf2a1Q99PM3 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gtf2a1Q99PM3 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC13.38□□□□□ -0.27
Gtf2a1Q99PM3 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gtf2a1Q99PM3 Smad2-201ENSMUST00000025453 2410 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gtf2a1Q99PM3 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Gtf2a1Q99PM3 Gm26684-202ENSMUST00000228229 8257 ntBASIC13.38□□□□□ -0.27
Gtf2a1Q99PM3 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gtf2a1Q99PM3 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gtf2a1Q99PM3 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC13.38□□□□□ -0.27
Gtf2a1Q99PM3 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Gtf2a1Q99PM3 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gtf2a1Q99PM3 AA619741-201ENSMUST00000195095 646 ntBASIC13.38□□□□□ -0.27
Gtf2a1Q99PM3 Rbfox2-207ENSMUST00000227533 1041 ntBASIC13.38□□□□□ -0.27
Gtf2a1Q99PM3 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gtf2a1Q99PM3 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gtf2a1Q99PM3 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gtf2a1Q99PM3 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gtf2a1Q99PM3 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Gtf2a1Q99PM3 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC13.38□□□□□ -0.27
Gtf2a1Q99PM3 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gtf2a1Q99PM3 AC138329.2-201ENSMUST00000225579 1842 ntBASIC13.38□□□□□ -0.27
Gtf2a1Q99PM3 Rnpc3-201ENSMUST00000092154 3888 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gtf2a1Q99PM3 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC13.38□□□□□ -0.27
Gtf2a1Q99PM3 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Gtf2a1Q99PM3 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gtf2a1Q99PM3 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC13.38□□□□□ -0.27
Gtf2a1Q99PM3 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gtf2a1Q99PM3 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gtf2a1Q99PM3 Gm40557-201ENSMUST00000220782 2736 ntTSL 5 BASIC13.38□□□□□ -0.27
Gtf2a1Q99PM3 Cntrl-201ENSMUST00000028235 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gtf2a1Q99PM3 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gtf2a1Q99PM3 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Gtf2a1Q99PM3 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gtf2a1Q99PM3 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC13.37□□□□□ -0.27
Gtf2a1Q99PM3 Gm5847-201ENSMUST00000178959 1595 ntBASIC13.37□□□□□ -0.27
Gtf2a1Q99PM3 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Gtf2a1Q99PM3 Ubash3a-201ENSMUST00000048656 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gtf2a1Q99PM3 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gtf2a1Q99PM3 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Gtf2a1Q99PM3 Elmo3-201ENSMUST00000109375 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gtf2a1Q99PM3 2310065F04Rik-201ENSMUST00000125538 2724 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Gtf2a1Q99PM3 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gtf2a1Q99PM3 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gtf2a1Q99PM3 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gtf2a1Q99PM3 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Gtf2a1Q99PM3 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gtf2a1Q99PM3 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.37□□□□□ -0.27
Gtf2a1Q99PM3 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC13.37□□□□□ -0.27
Gtf2a1Q99PM3 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Gtf2a1Q99PM3 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Gtf2a1Q99PM3 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC13.37□□□□□ -0.27
Gtf2a1Q99PM3 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Gtf2a1Q99PM3 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gtf2a1Q99PM3 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gtf2a1Q99PM3 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gtf2a1Q99PM3 AC174797.1-201ENSMUST00000224339 1649 ntBASIC13.37□□□□□ -0.27
Gtf2a1Q99PM3 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Gtf2a1Q99PM3 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.37□□□□□ -0.27
Gtf2a1Q99PM3 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Gtf2a1Q99PM3 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gtf2a1Q99PM3 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.37□□□□□ -0.27
Gtf2a1Q99PM3 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Gtf2a1Q99PM3 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gtf2a1Q99PM3 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gtf2a1Q99PM3 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gtf2a1Q99PM3 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Gtf2a1Q99PM3 Cx3cl1-201ENSMUST00000034230 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gtf2a1Q99PM3 Gm42826-201ENSMUST00000197548 2639 ntBASIC13.37□□□□□ -0.27
Gtf2a1Q99PM3 Grpr-201ENSMUST00000033730 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gtf2a1Q99PM3 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC13.37□□□□□ -0.27
Gtf2a1Q99PM3 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gtf2a1Q99PM3 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC13.37□□□□□ -0.27
Gtf2a1Q99PM3 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC13.36□□□□□ -0.27
Gtf2a1Q99PM3 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Gtf2a1Q99PM3 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gtf2a1Q99PM3 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Gtf2a1Q99PM3 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC13.36□□□□□ -0.27
Gtf2a1Q99PM3 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Gtf2a1Q99PM3 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gtf2a1Q99PM3 Pop1-201ENSMUST00000052290 3395 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gtf2a1Q99PM3 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gtf2a1Q99PM3 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.36□□□□□ -0.27
Gtf2a1Q99PM3 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Gtf2a1Q99PM3 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Gtf2a1Q99PM3 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Gtf2a1Q99PM3 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC13.36□□□□□ -0.27
Gtf2a1Q99PM3 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Gtf2a1Q99PM3 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Gtf2a1Q99PM3 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms