Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smc1bQ920F6 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smc1bQ920F6 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smc1bQ920F6 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Smc1bQ920F6 Gm45053-201ENSMUST00000206112 2499 ntBASIC14.22□□□□□ -0.13
Smc1bQ920F6 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smc1bQ920F6 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smc1bQ920F6 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smc1bQ920F6 Gm37472-201ENSMUST00000192342 4052 ntBASIC14.21□□□□□ -0.13
Smc1bQ920F6 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smc1bQ920F6 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smc1bQ920F6 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smc1bQ920F6 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smc1bQ920F6 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
Smc1bQ920F6 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Smc1bQ920F6 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smc1bQ920F6 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smc1bQ920F6 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC14.21□□□□□ -0.13
Smc1bQ920F6 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smc1bQ920F6 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smc1bQ920F6 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smc1bQ920F6 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Smc1bQ920F6 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Smc1bQ920F6 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smc1bQ920F6 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC14.21□□□□□ -0.13
Smc1bQ920F6 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC14.21□□□□□ -0.13
Smc1bQ920F6 Gm18734-201ENSMUST00000172937 808 ntBASIC14.21□□□□□ -0.13
Smc1bQ920F6 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Smc1bQ920F6 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smc1bQ920F6 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Smc1bQ920F6 Gm44126-201ENSMUST00000204831 514 ntBASIC14.21□□□□□ -0.13
Smc1bQ920F6 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC14.21□□□□□ -0.13
Smc1bQ920F6 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC14.21□□□□□ -0.13
Smc1bQ920F6 Dhrs4-202ENSMUST00000226168 828 ntBASIC14.21□□□□□ -0.13
Smc1bQ920F6 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smc1bQ920F6 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Smc1bQ920F6 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smc1bQ920F6 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smc1bQ920F6 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smc1bQ920F6 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Smc1bQ920F6 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC14.21□□□□□ -0.14
Smc1bQ920F6 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smc1bQ920F6 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smc1bQ920F6 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smc1bQ920F6 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC14.21□□□□□ -0.14
Smc1bQ920F6 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smc1bQ920F6 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Smc1bQ920F6 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smc1bQ920F6 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smc1bQ920F6 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Smc1bQ920F6 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smc1bQ920F6 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Smc1bQ920F6 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smc1bQ920F6 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Smc1bQ920F6 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smc1bQ920F6 Gm3287-205ENSMUST00000228893 1332 ntBASIC14.2□□□□□ -0.14
Smc1bQ920F6 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smc1bQ920F6 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smc1bQ920F6 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smc1bQ920F6 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smc1bQ920F6 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Smc1bQ920F6 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smc1bQ920F6 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC14.2□□□□□ -0.14
Smc1bQ920F6 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smc1bQ920F6 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smc1bQ920F6 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smc1bQ920F6 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
Smc1bQ920F6 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC14.2□□□□□ -0.14
Smc1bQ920F6 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC14.2□□□□□ -0.14
Smc1bQ920F6 Gm37201-201ENSMUST00000191845 523 ntBASIC14.2□□□□□ -0.14
Smc1bQ920F6 Gm43416-201ENSMUST00000201916 1015 ntBASIC14.2□□□□□ -0.14
Smc1bQ920F6 Gm45925-201ENSMUST00000218882 744 ntBASIC14.2□□□□□ -0.14
Smc1bQ920F6 Gzmn-202ENSMUST00000225535 989 ntBASIC14.2□□□□□ -0.14
Smc1bQ920F6 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Smc1bQ920F6 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smc1bQ920F6 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Smc1bQ920F6 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Smc1bQ920F6 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smc1bQ920F6 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smc1bQ920F6 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smc1bQ920F6 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smc1bQ920F6 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smc1bQ920F6 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smc1bQ920F6 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC14.19□□□□□ -0.14
Smc1bQ920F6 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smc1bQ920F6 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smc1bQ920F6 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smc1bQ920F6 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smc1bQ920F6 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smc1bQ920F6 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smc1bQ920F6 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smc1bQ920F6 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smc1bQ920F6 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smc1bQ920F6 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Smc1bQ920F6 Ighv8-10-201ENSMUST00000199579 358 ntBASIC14.19□□□□□ -0.14
Smc1bQ920F6 Gm45219-201ENSMUST00000205602 465 ntBASIC14.19□□□□□ -0.14
Smc1bQ920F6 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC14.19□□□□□ -0.14
Smc1bQ920F6 Gm44551-201ENSMUST00000208804 171 ntBASIC14.19□□□□□ -0.14
Smc1bQ920F6 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Smc1bQ920F6 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms