Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Pcdha3Q91Y16 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdha3Q91Y16 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdha3Q91Y16 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdha3Q91Y16 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdha3Q91Y16 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdha3Q91Y16 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdha3Q91Y16 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.87□□□□□ -0.35
Pcdha3Q91Y16 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Pcdha3Q91Y16 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Pcdha3Q91Y16 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdha3Q91Y16 Gm12314-201ENSMUST00000118104 538 ntBASIC12.87□□□□□ -0.35
Pcdha3Q91Y16 Gm13315-201ENSMUST00000120376 991 ntBASIC12.87□□□□□ -0.35
Pcdha3Q91Y16 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdha3Q91Y16 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.87□□□□□ -0.35
Pcdha3Q91Y16 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.87□□□□□ -0.35
Pcdha3Q91Y16 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.87□□□□□ -0.35
Pcdha3Q91Y16 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.87□□□□□ -0.35
Pcdha3Q91Y16 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.87□□□□□ -0.35
Pcdha3Q91Y16 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdha3Q91Y16 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Pcdha3Q91Y16 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdha3Q91Y16 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdha3Q91Y16 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdha3Q91Y16 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdha3Q91Y16 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdha3Q91Y16 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Pcdha3Q91Y16 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Pcdha3Q91Y16 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
Pcdha3Q91Y16 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdha3Q91Y16 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Pcdha3Q91Y16 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdha3Q91Y16 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdha3Q91Y16 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdha3Q91Y16 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdha3Q91Y16 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdha3Q91Y16 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdha3Q91Y16 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdha3Q91Y16 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdha3Q91Y16 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdha3Q91Y16 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdha3Q91Y16 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdha3Q91Y16 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdha3Q91Y16 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Pcdha3Q91Y16 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdha3Q91Y16 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdha3Q91Y16 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.86□□□□□ -0.35
Pcdha3Q91Y16 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdha3Q91Y16 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Pcdha3Q91Y16 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Pcdha3Q91Y16 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdha3Q91Y16 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Pcdha3Q91Y16 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdha3Q91Y16 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdha3Q91Y16 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Pcdha3Q91Y16 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Pcdha3Q91Y16 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdha3Q91Y16 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdha3Q91Y16 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.86□□□□□ -0.35
Pcdha3Q91Y16 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.86□□□□□ -0.35
Pcdha3Q91Y16 Gm11531-201ENSMUST00000117614 555 ntBASIC12.86□□□□□ -0.35
Pcdha3Q91Y16 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.86□□□□□ -0.35
Pcdha3Q91Y16 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdha3Q91Y16 Gm27243-201ENSMUST00000183964 521 ntBASIC12.86□□□□□ -0.35
Pcdha3Q91Y16 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdha3Q91Y16 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdha3Q91Y16 Gm5950-201ENSMUST00000213337 772 ntBASIC12.86□□□□□ -0.35
Pcdha3Q91Y16 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdha3Q91Y16 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdha3Q91Y16 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdha3Q91Y16 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdha3Q91Y16 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdha3Q91Y16 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdha3Q91Y16 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Pcdha3Q91Y16 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdha3Q91Y16 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdha3Q91Y16 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdha3Q91Y16 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdha3Q91Y16 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdha3Q91Y16 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdha3Q91Y16 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdha3Q91Y16 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdha3Q91Y16 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.86□□□□□ -0.35
Pcdha3Q91Y16 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdha3Q91Y16 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdha3Q91Y16 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.85□□□□□ -0.35
Pcdha3Q91Y16 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Pcdha3Q91Y16 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.85□□□□□ -0.35
Pcdha3Q91Y16 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdha3Q91Y16 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Pcdha3Q91Y16 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdha3Q91Y16 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdha3Q91Y16 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.85□□□□□ -0.35
Pcdha3Q91Y16 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdha3Q91Y16 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdha3Q91Y16 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.85□□□□□ -0.35
Pcdha3Q91Y16 Gm24255-201ENSMUST00000104481 128 ntBASIC12.85□□□□□ -0.35
Pcdha3Q91Y16 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdha3Q91Y16 Gm14999-201ENSMUST00000121039 624 ntBASIC12.85□□□□□ -0.35
Pcdha3Q91Y16 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms