Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga6Q91XY2 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga6Q91XY2 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga6Q91XY2 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Pcdhga6Q91XY2 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.29□□□□□ -0.44
Pcdhga6Q91XY2 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Pcdhga6Q91XY2 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga6Q91XY2 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga6Q91XY2 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.29□□□□□ -0.44
Pcdhga6Q91XY2 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga6Q91XY2 Gm12029-201ENSMUST00000120073 832 ntBASIC12.29□□□□□ -0.44
Pcdhga6Q91XY2 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga6Q91XY2 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga6Q91XY2 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.29□□□□□ -0.44
Pcdhga6Q91XY2 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Pcdhga6Q91XY2 Gm27627-201ENSMUST00000183644 150 ntBASIC12.29□□□□□ -0.44
Pcdhga6Q91XY2 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.29□□□□□ -0.44
Pcdhga6Q91XY2 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Pcdhga6Q91XY2 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.29□□□□□ -0.44
Pcdhga6Q91XY2 Gm45598-202ENSMUST00000210719 986 ntBASIC12.29□□□□□ -0.44
Pcdhga6Q91XY2 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga6Q91XY2 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC12.29□□□□□ -0.44
Pcdhga6Q91XY2 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.29□□□□□ -0.44
Pcdhga6Q91XY2 AC154849.4-201ENSMUST00000224868 365 ntBASIC12.29□□□□□ -0.44
Pcdhga6Q91XY2 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga6Q91XY2 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga6Q91XY2 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga6Q91XY2 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga6Q91XY2 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga6Q91XY2 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.29□□□□□ -0.44
Pcdhga6Q91XY2 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga6Q91XY2 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga6Q91XY2 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.29□□□□□ -0.44
Pcdhga6Q91XY2 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga6Q91XY2 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga6Q91XY2 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.29□□□□□ -0.44
Pcdhga6Q91XY2 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Pcdhga6Q91XY2 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.29□□□□□ -0.44
Pcdhga6Q91XY2 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga6Q91XY2 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga6Q91XY2 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga6Q91XY2 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga6Q91XY2 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Pcdhga6Q91XY2 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga6Q91XY2 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga6Q91XY2 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga6Q91XY2 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga6Q91XY2 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga6Q91XY2 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Pcdhga6Q91XY2 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.28□□□□□ -0.44
Pcdhga6Q91XY2 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga6Q91XY2 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga6Q91XY2 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga6Q91XY2 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.28□□□□□ -0.44
Pcdhga6Q91XY2 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga6Q91XY2 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga6Q91XY2 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga6Q91XY2 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga6Q91XY2 Gm11450-201ENSMUST00000121144 333 ntBASIC12.28□□□□□ -0.44
Pcdhga6Q91XY2 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.28□□□□□ -0.44
Pcdhga6Q91XY2 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Pcdhga6Q91XY2 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.28□□□□□ -0.44
Pcdhga6Q91XY2 Gm5778-201ENSMUST00000171003 1072 ntBASIC12.28□□□□□ -0.44
Pcdhga6Q91XY2 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.28□□□□□ -0.44
Pcdhga6Q91XY2 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Pcdhga6Q91XY2 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC12.28□□□□□ -0.44
Pcdhga6Q91XY2 Gm38092-201ENSMUST00000195600 653 ntBASIC12.28□□□□□ -0.44
Pcdhga6Q91XY2 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.28□□□□□ -0.44
Pcdhga6Q91XY2 Gm10752-201ENSMUST00000218348 729 ntBASIC12.28□□□□□ -0.44
Pcdhga6Q91XY2 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.28□□□□□ -0.44
Pcdhga6Q91XY2 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Pcdhga6Q91XY2 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga6Q91XY2 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga6Q91XY2 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga6Q91XY2 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga6Q91XY2 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga6Q91XY2 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga6Q91XY2 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga6Q91XY2 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga6Q91XY2 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Pcdhga6Q91XY2 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga6Q91XY2 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga6Q91XY2 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga6Q91XY2 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Pcdhga6Q91XY2 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.28□□□□□ -0.44
Pcdhga6Q91XY2 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga6Q91XY2 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Pcdhga6Q91XY2 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdhga6Q91XY2 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdhga6Q91XY2 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdhga6Q91XY2 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.27□□□□□ -0.44
Pcdhga6Q91XY2 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Pcdhga6Q91XY2 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdhga6Q91XY2 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Pcdhga6Q91XY2 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdhga6Q91XY2 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.44
Pcdhga6Q91XY2 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdhga6Q91XY2 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.27□□□□□ -0.45
Pcdhga6Q91XY2 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhga6Q91XY2 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms