Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Vps13aQ5H8C4 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Vps13aQ5H8C4 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Vps13aQ5H8C4 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Vps13aQ5H8C4 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps13aQ5H8C4 AC153152.3-201ENSMUST00000222188 1135 ntBASIC11.83□□□□□ -0.52
Vps13aQ5H8C4 AC158392.3-201ENSMUST00000224271 1284 ntBASIC11.83□□□□□ -0.52
Vps13aQ5H8C4 Gm23105-201ENSMUST00000083719 134 ntBASIC11.83□□□□□ -0.52
Vps13aQ5H8C4 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps13aQ5H8C4 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps13aQ5H8C4 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.83□□□□□ -0.52
Vps13aQ5H8C4 Ccm2-203ENSMUST00000109722 1760 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Vps13aQ5H8C4 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Vps13aQ5H8C4 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps13aQ5H8C4 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps13aQ5H8C4 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Vps13aQ5H8C4 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps13aQ5H8C4 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps13aQ5H8C4 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Vps13aQ5H8C4 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.83□□□□□ -0.52
Vps13aQ5H8C4 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps13aQ5H8C4 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.83□□□□□ -0.52
Vps13aQ5H8C4 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Vps13aQ5H8C4 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC11.83□□□□□ -0.52
Vps13aQ5H8C4 Gm26982-201ENSMUST00000182250 1151 ntBASIC11.83□□□□□ -0.52
Vps13aQ5H8C4 Gm27675-201ENSMUST00000184527 94 ntBASIC11.83□□□□□ -0.52
Vps13aQ5H8C4 Gm44814-201ENSMUST00000207018 434 ntBASIC11.83□□□□□ -0.52
Vps13aQ5H8C4 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps13aQ5H8C4 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps13aQ5H8C4 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps13aQ5H8C4 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vps13aQ5H8C4 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Vps13aQ5H8C4 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Vps13aQ5H8C4 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Vps13aQ5H8C4 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Vps13aQ5H8C4 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vps13aQ5H8C4 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vps13aQ5H8C4 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Vps13aQ5H8C4 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vps13aQ5H8C4 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Vps13aQ5H8C4 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC11.82□□□□□ -0.52
Vps13aQ5H8C4 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vps13aQ5H8C4 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vps13aQ5H8C4 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vps13aQ5H8C4 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vps13aQ5H8C4 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Vps13aQ5H8C4 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.82□□□□□ -0.52
Vps13aQ5H8C4 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vps13aQ5H8C4 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vps13aQ5H8C4 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Vps13aQ5H8C4 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vps13aQ5H8C4 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vps13aQ5H8C4 Rhox12-203ENSMUST00000183737 761 ntTSL 3 BASIC11.82□□□□□ -0.52
Vps13aQ5H8C4 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Vps13aQ5H8C4 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vps13aQ5H8C4 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Vps13aQ5H8C4 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Vps13aQ5H8C4 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.82□□□□□ -0.52
Vps13aQ5H8C4 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Vps13aQ5H8C4 Gm15519-201ENSMUST00000120088 1566 ntBASIC11.82□□□□□ -0.52
Vps13aQ5H8C4 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vps13aQ5H8C4 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Vps13aQ5H8C4 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vps13aQ5H8C4 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vps13aQ5H8C4 Map1b-203ENSMUST00000223725 2669 ntBASIC11.82□□□□□ -0.52
Vps13aQ5H8C4 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC11.82□□□□□ -0.52
Vps13aQ5H8C4 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Vps13aQ5H8C4 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.82□□□□□ -0.52
Vps13aQ5H8C4 Gm9673-201ENSMUST00000119287 781 ntBASIC11.81□□□□□ -0.52
Vps13aQ5H8C4 Gm8459-201ENSMUST00000162504 760 ntBASIC11.81□□□□□ -0.52
Vps13aQ5H8C4 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Vps13aQ5H8C4 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Vps13aQ5H8C4 Gm18552-201ENSMUST00000187425 538 ntBASIC11.81□□□□□ -0.52
Vps13aQ5H8C4 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Vps13aQ5H8C4 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vps13aQ5H8C4 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.81□□□□□ -0.52
Vps13aQ5H8C4 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Vps13aQ5H8C4 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Vps13aQ5H8C4 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vps13aQ5H8C4 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vps13aQ5H8C4 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Vps13aQ5H8C4 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vps13aQ5H8C4 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC11.81□□□□□ -0.52
Vps13aQ5H8C4 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vps13aQ5H8C4 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vps13aQ5H8C4 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vps13aQ5H8C4 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vps13aQ5H8C4 Gm11996-201ENSMUST00000117538 915 ntBASIC11.81□□□□□ -0.52
Vps13aQ5H8C4 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.81□□□□□ -0.52
Vps13aQ5H8C4 Gm13039-201ENSMUST00000118638 794 ntBASIC11.81□□□□□ -0.52
Vps13aQ5H8C4 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Vps13aQ5H8C4 Gm5210-201ENSMUST00000182150 1010 ntBASIC11.81□□□□□ -0.52
Vps13aQ5H8C4 Gm7627-201ENSMUST00000183205 999 ntBASIC11.81□□□□□ -0.52
Vps13aQ5H8C4 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC11.81□□□□□ -0.52
Vps13aQ5H8C4 2810049E08Rik-201ENSMUST00000185600 1102 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Vps13aQ5H8C4 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC11.81□□□□□ -0.52
Vps13aQ5H8C4 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.81□□□□□ -0.52
Vps13aQ5H8C4 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vps13aQ5H8C4 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vps13aQ5H8C4 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms