Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC11.8□□□□□ -0.52
Hoxc4Q08624 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC11.8□□□□□ -0.52
Hoxc4Q08624 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc4Q08624 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc4Q08624 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc4Q08624 Pcgf5-211ENSMUST00000225920 6443 ntBASIC11.8□□□□□ -0.52
Hoxc4Q08624 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.8□□□□□ -0.52
Hoxc4Q08624 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Hoxc4Q08624 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc4Q08624 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc4Q08624 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc4Q08624 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.8□□□□□ -0.52
Hoxc4Q08624 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.8□□□□□ -0.52
Hoxc4Q08624 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc4Q08624 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc4Q08624 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Hoxc4Q08624 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.8□□□□□ -0.52
Hoxc4Q08624 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc4Q08624 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc4Q08624 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc4Q08624 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc4Q08624 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc4Q08624 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc4Q08624 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.79□□□□□ -0.52
Hoxc4Q08624 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Hoxc4Q08624 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Hoxc4Q08624 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc4Q08624 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc4Q08624 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Hoxc4Q08624 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Hoxc4Q08624 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.79□□□□□ -0.52
Hoxc4Q08624 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc4Q08624 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc4Q08624 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Hoxc4Q08624 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc4Q08624 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc4Q08624 Gm9062-201ENSMUST00000117712 727 ntBASIC11.79□□□□□ -0.52
Hoxc4Q08624 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc4Q08624 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC11.79□□□□□ -0.52
Hoxc4Q08624 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.79□□□□□ -0.52
Hoxc4Q08624 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.79□□□□□ -0.52
Hoxc4Q08624 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC11.79□□□□□ -0.52
Hoxc4Q08624 Gm7207-201ENSMUST00000211575 1067 ntBASIC11.79□□□□□ -0.52
Hoxc4Q08624 Gm5369-201ENSMUST00000217499 588 ntBASIC11.79□□□□□ -0.52
Hoxc4Q08624 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc4Q08624 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc4Q08624 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc4Q08624 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc4Q08624 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.79□□□□□ -0.52
Hoxc4Q08624 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.79□□□□□ -0.52
Hoxc4Q08624 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc4Q08624 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc4Q08624 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc4Q08624 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC11.79□□□□□ -0.52
Hoxc4Q08624 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc4Q08624 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc4Q08624 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc4Q08624 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc4Q08624 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc4Q08624 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxc4Q08624 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Hoxc4Q08624 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxc4Q08624 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxc4Q08624 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxc4Q08624 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxc4Q08624 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Hoxc4Q08624 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxc4Q08624 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Hoxc4Q08624 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxc4Q08624 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Hoxc4Q08624 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxc4Q08624 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Hoxc4Q08624 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Hoxc4Q08624 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxc4Q08624 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxc4Q08624 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxc4Q08624 Gm11509-201ENSMUST00000117358 325 ntBASIC11.78□□□□□ -0.52
Hoxc4Q08624 Gm11331-201ENSMUST00000119764 288 ntBASIC11.78□□□□□ -0.52
Hoxc4Q08624 Gm8566-201ENSMUST00000120174 465 ntBASIC11.78□□□□□ -0.52
Hoxc4Q08624 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxc4Q08624 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC11.78□□□□□ -0.52
Hoxc4Q08624 Gm8100-201ENSMUST00000182906 988 ntBASIC11.78□□□□□ -0.52
Hoxc4Q08624 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.78□□□□□ -0.52
Hoxc4Q08624 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxc4Q08624 Spcs1-203ENSMUST00000226374 592 ntBASIC11.78□□□□□ -0.52
Hoxc4Q08624 Gm42928-201ENSMUST00000197338 3339 ntBASIC11.78□□□□□ -0.52
Hoxc4Q08624 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxc4Q08624 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Hoxc4Q08624 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.78□□□□□ -0.52
Hoxc4Q08624 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxc4Q08624 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.78□□□□□ -0.52
Hoxc4Q08624 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Hoxc4Q08624 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxc4Q08624 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxc4Q08624 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxc4Q08624 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.78□□□□□ -0.52
Hoxc4Q08624 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxc4Q08624 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxc4Q08624 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxc4Q08624 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 93.6 ms