Protein–RNA interactions for Protein: Q06507

Atf4, Cyclic AMP-dependent transcription factor ATF-4, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf4Q06507 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Atf4Q06507 Gm21970-201ENSMUST00000160764 884 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Atf4Q06507 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Atf4Q06507 Gm29516-201ENSMUST00000190402 468 ntBASIC12.07□□□□□ -0.48
Atf4Q06507 Gm18348-201ENSMUST00000191227 820 ntBASIC12.07□□□□□ -0.48
Atf4Q06507 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Atf4Q06507 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.07□□□□□ -0.48
Atf4Q06507 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Atf4Q06507 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Atf4Q06507 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC12.07□□□□□ -0.48
Atf4Q06507 Gm45186-201ENSMUST00000206874 478 ntBASIC12.07□□□□□ -0.48
Atf4Q06507 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.07□□□□□ -0.48
Atf4Q06507 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.07□□□□□ -0.48
Atf4Q06507 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Atf4Q06507 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Atf4Q06507 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Atf4Q06507 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Atf4Q06507 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Atf4Q06507 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Atf4Q06507 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.07□□□□□ -0.48
Atf4Q06507 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Atf4Q06507 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Atf4Q06507 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Atf4Q06507 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Atf4Q06507 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Atf4Q06507 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Atf4Q06507 Gm43341-201ENSMUST00000200104 1308 ntBASIC12.07□□□□□ -0.48
Atf4Q06507 Gm9333-201ENSMUST00000205452 1323 ntBASIC12.07□□□□□ -0.48
Atf4Q06507 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Atf4Q06507 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.07□□□□□ -0.48
Atf4Q06507 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Atf4Q06507 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atf4Q06507 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Atf4Q06507 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Atf4Q06507 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atf4Q06507 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atf4Q06507 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.06□□□□□ -0.48
Atf4Q06507 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Atf4Q06507 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atf4Q06507 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.06□□□□□ -0.48
Atf4Q06507 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atf4Q06507 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atf4Q06507 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Atf4Q06507 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atf4Q06507 Gm37234-201ENSMUST00000193259 1441 ntBASIC12.06□□□□□ -0.48
Atf4Q06507 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atf4Q06507 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atf4Q06507 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atf4Q06507 Gm24830-201ENSMUST00000102024 166 ntBASIC12.06□□□□□ -0.48
Atf4Q06507 Gm4909-201ENSMUST00000118749 794 ntBASIC12.06□□□□□ -0.48
Atf4Q06507 Gm11266-201ENSMUST00000139835 1271 ntTSL 2 BASIC12.06□□□□□ -0.48
Atf4Q06507 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Atf4Q06507 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC12.06□□□□□ -0.48
Atf4Q06507 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Atf4Q06507 Gm24990-201ENSMUST00000157406 323 ntBASIC12.06□□□□□ -0.48
Atf4Q06507 Gm16147-201ENSMUST00000162143 373 ntBASIC12.06□□□□□ -0.48
Atf4Q06507 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Atf4Q06507 Gm13147-202ENSMUST00000177526 1173 ntBASIC12.06□□□□□ -0.48
Atf4Q06507 Gm25890-201ENSMUST00000177643 165 ntBASIC12.06□□□□□ -0.48
Atf4Q06507 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.06□□□□□ -0.48
Atf4Q06507 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.06□□□□□ -0.48
Atf4Q06507 Gm22614-201ENSMUST00000178300 165 ntBASIC12.06□□□□□ -0.48
Atf4Q06507 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC12.06□□□□□ -0.48
Atf4Q06507 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.06□□□□□ -0.48
Atf4Q06507 Gm44069-201ENSMUST00000204898 506 ntBASIC12.06□□□□□ -0.48
Atf4Q06507 Gm45078-201ENSMUST00000205343 546 ntBASIC12.06□□□□□ -0.48
Atf4Q06507 Gm5781-201ENSMUST00000219792 443 ntBASIC12.06□□□□□ -0.48
Atf4Q06507 Gm35135-201ENSMUST00000219885 990 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Atf4Q06507 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atf4Q06507 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atf4Q06507 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atf4Q06507 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atf4Q06507 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Atf4Q06507 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atf4Q06507 Gm22042-201ENSMUST00000082989 165 ntBASIC12.06□□□□□ -0.48
Atf4Q06507 Gm26232-201ENSMUST00000083360 166 ntBASIC12.06□□□□□ -0.48
Atf4Q06507 Gm24136-201ENSMUST00000083374 165 ntBASIC12.06□□□□□ -0.48
Atf4Q06507 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.06□□□□□ -0.48
Atf4Q06507 Gm26110-201ENSMUST00000083971 165 ntBASIC12.06□□□□□ -0.48
Atf4Q06507 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.06□□□□□ -0.48
Atf4Q06507 Gm10354-201ENSMUST00000096953 1215 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Atf4Q06507 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.06□□□□□ -0.48
Atf4Q06507 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atf4Q06507 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atf4Q06507 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atf4Q06507 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Atf4Q06507 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Atf4Q06507 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atf4Q06507 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.06□□□□□ -0.48
Atf4Q06507 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Atf4Q06507 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atf4Q06507 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atf4Q06507 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atf4Q06507 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atf4Q06507 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Atf4Q06507 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atf4Q06507 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Atf4Q06507 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Atf4Q06507 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Atf4Q06507 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms