Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Col10a1Q05306 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col10a1Q05306 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col10a1Q05306 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col10a1Q05306 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col10a1Q05306 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col10a1Q05306 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col10a1Q05306 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col10a1Q05306 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.35□□□□□ -0.59
Col10a1Q05306 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col10a1Q05306 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col10a1Q05306 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Col10a1Q05306 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col10a1Q05306 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Col10a1Q05306 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Col10a1Q05306 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col10a1Q05306 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col10a1Q05306 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.35□□□□□ -0.59
Col10a1Q05306 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col10a1Q05306 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col10a1Q05306 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.34□□□□□ -0.59
Col10a1Q05306 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.34□□□□□ -0.59
Col10a1Q05306 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col10a1Q05306 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col10a1Q05306 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col10a1Q05306 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Col10a1Q05306 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Col10a1Q05306 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col10a1Q05306 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col10a1Q05306 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col10a1Q05306 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col10a1Q05306 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col10a1Q05306 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Col10a1Q05306 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col10a1Q05306 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
Col10a1Q05306 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col10a1Q05306 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col10a1Q05306 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Col10a1Q05306 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col10a1Q05306 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col10a1Q05306 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col10a1Q05306 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col10a1Q05306 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.34□□□□□ -0.59
Col10a1Q05306 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col10a1Q05306 Gm14832-201ENSMUST00000121289 322 ntBASIC11.34□□□□□ -0.59
Col10a1Q05306 Gm15547-201ENSMUST00000122152 333 ntBASIC11.34□□□□□ -0.59
Col10a1Q05306 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
Col10a1Q05306 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Col10a1Q05306 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Col10a1Q05306 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Col10a1Q05306 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.34□□□□□ -0.59
Col10a1Q05306 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.34□□□□□ -0.59
Col10a1Q05306 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC11.34□□□□□ -0.59
Col10a1Q05306 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.34□□□□□ -0.59
Col10a1Q05306 Gm7783-201ENSMUST00000204795 781 ntBASIC11.34□□□□□ -0.59
Col10a1Q05306 Gm8712-201ENSMUST00000221090 701 ntBASIC11.34□□□□□ -0.59
Col10a1Q05306 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.34□□□□□ -0.59
Col10a1Q05306 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Col10a1Q05306 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.34□□□□□ -0.59
Col10a1Q05306 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col10a1Q05306 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col10a1Q05306 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col10a1Q05306 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Col10a1Q05306 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col10a1Q05306 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col10a1Q05306 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col10a1Q05306 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col10a1Q05306 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Col10a1Q05306 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col10a1Q05306 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Col10a1Q05306 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col10a1Q05306 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Col10a1Q05306 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col10a1Q05306 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col10a1Q05306 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col10a1Q05306 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Col10a1Q05306 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col10a1Q05306 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col10a1Q05306 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Col10a1Q05306 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Col10a1Q05306 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.33□□□□□ -0.6
Col10a1Q05306 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col10a1Q05306 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Col10a1Q05306 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Col10a1Q05306 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col10a1Q05306 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Col10a1Q05306 Gm24255-201ENSMUST00000104481 128 ntBASIC11.33□□□□□ -0.6
Col10a1Q05306 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Col10a1Q05306 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Col10a1Q05306 Gm14381-201ENSMUST00000122105 414 ntBASIC11.33□□□□□ -0.6
Col10a1Q05306 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Col10a1Q05306 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.33□□□□□ -0.6
Col10a1Q05306 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Col10a1Q05306 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col10a1Q05306 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC11.33□□□□□ -0.6
Col10a1Q05306 Gm44124-201ENSMUST00000204159 472 ntBASIC11.33□□□□□ -0.6
Col10a1Q05306 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Col10a1Q05306 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.33□□□□□ -0.6
Col10a1Q05306 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col10a1Q05306 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms