Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox3P53784 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.81□□□□□ -0.52
Sox3P53784 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sox3P53784 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.81□□□□□ -0.52
Sox3P53784 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sox3P53784 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox3P53784 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sox3P53784 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox3P53784 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox3P53784 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox3P53784 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox3P53784 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sox3P53784 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.81□□□□□ -0.52
Sox3P53784 Gm9062-201ENSMUST00000117712 727 ntBASIC11.81□□□□□ -0.52
Sox3P53784 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC11.81□□□□□ -0.52
Sox3P53784 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.81□□□□□ -0.52
Sox3P53784 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.81□□□□□ -0.52
Sox3P53784 Gm3096-201ENSMUST00000185770 364 ntBASIC11.81□□□□□ -0.52
Sox3P53784 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC11.81□□□□□ -0.52
Sox3P53784 Gm28693-202ENSMUST00000190758 331 ntBASIC11.81□□□□□ -0.52
Sox3P53784 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.81□□□□□ -0.52
Sox3P53784 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.81□□□□□ -0.52
Sox3P53784 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sox3P53784 Gm32025-201ENSMUST00000217960 307 ntBASIC11.81□□□□□ -0.52
Sox3P53784 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Sox3P53784 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox3P53784 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Sox3P53784 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Sox3P53784 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox3P53784 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox3P53784 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox3P53784 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox3P53784 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sox3P53784 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sox3P53784 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox3P53784 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox3P53784 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Sox3P53784 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox3P53784 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox3P53784 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Sox3P53784 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sox3P53784 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox3P53784 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox3P53784 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox3P53784 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Sox3P53784 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.8□□□□□ -0.52
Sox3P53784 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox3P53784 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Sox3P53784 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Sox3P53784 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox3P53784 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Sox3P53784 Gm13408-201ENSMUST00000119822 798 ntBASIC11.8□□□□□ -0.52
Sox3P53784 Gm11667-201ENSMUST00000119828 486 ntBASIC11.8□□□□□ -0.52
Sox3P53784 Gm13935-201ENSMUST00000121859 798 ntBASIC11.8□□□□□ -0.52
Sox3P53784 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sox3P53784 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Sox3P53784 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.8□□□□□ -0.52
Sox3P53784 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox3P53784 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox3P53784 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox3P53784 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sox3P53784 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.8□□□□□ -0.52
Sox3P53784 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox3P53784 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Sox3P53784 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Sox3P53784 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox3P53784 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox3P53784 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Sox3P53784 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.79□□□□□ -0.52
Sox3P53784 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Sox3P53784 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.79□□□□□ -0.52
Sox3P53784 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.79□□□□□ -0.52
Sox3P53784 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sox3P53784 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox3P53784 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Sox3P53784 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox3P53784 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.79□□□□□ -0.52
Sox3P53784 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox3P53784 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox3P53784 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox3P53784 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.79□□□□□ -0.52
Sox3P53784 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox3P53784 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.79□□□□□ -0.52
Sox3P53784 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sox3P53784 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sox3P53784 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sox3P53784 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Sox3P53784 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox3P53784 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox3P53784 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox3P53784 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox3P53784 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox3P53784 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox3P53784 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox3P53784 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox3P53784 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox3P53784 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox3P53784 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox3P53784 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox3P53784 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms