Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm13827-201ENSMUST00000148801 372 ntBASIC15.85■□□□□ 0.13
Col18a1P39061 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC15.85■□□□□ 0.13
Col18a1P39061 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Col18a1P39061 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Col18a1P39061 Gm37207-201ENSMUST00000194284 296 ntBASIC15.85■□□□□ 0.13
Col18a1P39061 Gm31274-201ENSMUST00000197356 229 ntBASIC15.85■□□□□ 0.13
Col18a1P39061 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC15.85■□□□□ 0.13
Col18a1P39061 CT025603.1-201ENSMUST00000224040 448 ntBASIC15.85■□□□□ 0.13
Col18a1P39061 AC115304.2-201ENSMUST00000226399 332 ntBASIC15.85■□□□□ 0.13
Col18a1P39061 AC121357.1-201ENSMUST00000227365 608 ntBASIC15.85■□□□□ 0.13
Col18a1P39061 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col18a1P39061 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Col18a1P39061 n-R5s71-201ENSMUST00000093668 119 ntBASIC15.85■□□□□ 0.13
Col18a1P39061 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC15.85■□□□□ 0.13
Col18a1P39061 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Col18a1P39061 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.85■□□□□ 0.13
Col18a1P39061 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Col18a1P39061 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Col18a1P39061 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col18a1P39061 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.84■□□□□ 0.13
Col18a1P39061 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col18a1P39061 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Col18a1P39061 Gm42970-201ENSMUST00000196407 1352 ntBASIC15.84■□□□□ 0.13
Col18a1P39061 Gm23604-201ENSMUST00000104311 132 ntBASIC15.84■□□□□ 0.13
Col18a1P39061 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Col18a1P39061 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Col18a1P39061 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col18a1P39061 AC154589.2-201ENSMUST00000228847 251 ntBASIC15.84■□□□□ 0.13
Col18a1P39061 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col18a1P39061 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col18a1P39061 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Col18a1P39061 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Col18a1P39061 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col18a1P39061 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col18a1P39061 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col18a1P39061 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col18a1P39061 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC15.84■□□□□ 0.13
Col18a1P39061 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Col18a1P39061 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.83■□□□□ 0.13
Col18a1P39061 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Col18a1P39061 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Col18a1P39061 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Col18a1P39061 Gm6158-201ENSMUST00000109467 904 ntBASIC15.83■□□□□ 0.12
Col18a1P39061 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC15.83■□□□□ 0.12
Col18a1P39061 Gm4462-201ENSMUST00000166453 492 ntBASIC15.83■□□□□ 0.12
Col18a1P39061 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Col18a1P39061 Gm43547-201ENSMUST00000197729 328 ntBASIC15.83■□□□□ 0.12
Col18a1P39061 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Col18a1P39061 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC15.83■□□□□ 0.12
Col18a1P39061 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Col18a1P39061 AC129975.1-201ENSMUST00000224816 592 ntBASIC15.83■□□□□ 0.12
Col18a1P39061 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Col18a1P39061 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col18a1P39061 Gm1840-201ENSMUST00000051687 1432 ntBASIC15.83■□□□□ 0.12
Col18a1P39061 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col18a1P39061 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col18a1P39061 Gm15519-201ENSMUST00000120088 1566 ntBASIC15.83■□□□□ 0.12
Col18a1P39061 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col18a1P39061 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Col18a1P39061 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col18a1P39061 Gm43167-201ENSMUST00000202001 1606 ntBASIC15.83■□□□□ 0.12
Col18a1P39061 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col18a1P39061 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Col18a1P39061 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Col18a1P39061 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC15.82■□□□□ 0.12
Col18a1P39061 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col18a1P39061 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC15.82■□□□□ 0.12
Col18a1P39061 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC15.82■□□□□ 0.12
Col18a1P39061 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col18a1P39061 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC15.82■□□□□ 0.12
Col18a1P39061 Gm4903-201ENSMUST00000210462 405 ntBASIC15.82■□□□□ 0.12
Col18a1P39061 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Col18a1P39061 Gm10580-201ENSMUST00000097985 396 ntBASIC15.82■□□□□ 0.12
Col18a1P39061 Gm10582-201ENSMUST00000097987 396 ntBASIC15.82■□□□□ 0.12
Col18a1P39061 Gm10583-201ENSMUST00000097988 396 ntBASIC15.82■□□□□ 0.12
Col18a1P39061 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col18a1P39061 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col18a1P39061 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col18a1P39061 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col18a1P39061 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Col18a1P39061 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col18a1P39061 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col18a1P39061 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col18a1P39061 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col18a1P39061 AC022682.1-201ENSMUST00000224624 2023 ntBASIC15.82■□□□□ 0.12
Col18a1P39061 Gm37600-201ENSMUST00000193764 3292 ntBASIC15.82■□□□□ 0.12
Col18a1P39061 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col18a1P39061 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col18a1P39061 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col18a1P39061 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col18a1P39061 Pradc1-204ENSMUST00000126805 953 ntTSL 2 BASIC15.82■□□□□ 0.12
Col18a1P39061 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC15.82■□□□□ 0.12
Col18a1P39061 Gm24992-201ENSMUST00000157412 130 ntBASIC15.82■□□□□ 0.12
Col18a1P39061 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Col18a1P39061 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC15.82■□□□□ 0.12
Col18a1P39061 Gm44814-201ENSMUST00000207018 434 ntBASIC15.82■□□□□ 0.12
Col18a1P39061 Gm8255-201ENSMUST00000218693 305 ntBASIC15.82■□□□□ 0.12
Col18a1P39061 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col18a1P39061 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Col18a1P39061 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms