Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC10.76□□□□□ -0.69
Upk2P38575 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Upk2P38575 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC10.76□□□□□ -0.69
Upk2P38575 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Upk2P38575 Gm14127-201ENSMUST00000117906 678 ntBASIC10.76□□□□□ -0.69
Upk2P38575 Gm14832-201ENSMUST00000121289 322 ntBASIC10.76□□□□□ -0.69
Upk2P38575 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC10.76□□□□□ -0.69
Upk2P38575 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC10.76□□□□□ -0.69
Upk2P38575 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Upk2P38575 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
Upk2P38575 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Upk2P38575 Olfr284-202ENSMUST00000206647 966 ntBASIC10.76□□□□□ -0.69
Upk2P38575 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Upk2P38575 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
Upk2P38575 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Upk2P38575 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Upk2P38575 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Upk2P38575 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Upk2P38575 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Upk2P38575 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Upk2P38575 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Upk2P38575 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Upk2P38575 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Upk2P38575 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Upk2P38575 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Upk2P38575 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Upk2P38575 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Upk2P38575 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Upk2P38575 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Upk2P38575 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC10.76□□□□□ -0.69
Upk2P38575 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Upk2P38575 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Upk2P38575 Map1b-203ENSMUST00000223725 2669 ntBASIC10.76□□□□□ -0.69
Upk2P38575 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Upk2P38575 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Upk2P38575 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC10.76□□□□□ -0.69
Upk2P38575 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Upk2P38575 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Upk2P38575 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Upk2P38575 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Upk2P38575 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Upk2P38575 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Upk2P38575 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Upk2P38575 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Upk2P38575 Gm37513-201ENSMUST00000194830 2268 ntBASIC10.75□□□□□ -0.69
Upk2P38575 Gm38378-201ENSMUST00000195153 2268 ntBASIC10.75□□□□□ -0.69
Upk2P38575 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Upk2P38575 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Upk2P38575 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
Upk2P38575 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Upk2P38575 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Upk2P38575 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Upk2P38575 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Upk2P38575 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC10.75□□□□□ -0.69
Upk2P38575 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Upk2P38575 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Upk2P38575 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Upk2P38575 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Upk2P38575 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Upk2P38575 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Upk2P38575 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Upk2P38575 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Upk2P38575 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Upk2P38575 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Upk2P38575 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Upk2P38575 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Upk2P38575 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Upk2P38575 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC10.75□□□□□ -0.69
Upk2P38575 Gm24845-201ENSMUST00000158034 109 ntBASIC10.75□□□□□ -0.69
Upk2P38575 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Upk2P38575 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC10.75□□□□□ -0.69
Upk2P38575 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC10.75□□□□□ -0.69
Upk2P38575 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Upk2P38575 Gm18711-201ENSMUST00000199341 750 ntBASIC10.75□□□□□ -0.69
Upk2P38575 Gm6013-201ENSMUST00000212264 699 ntBASIC10.75□□□□□ -0.69
Upk2P38575 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Upk2P38575 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Upk2P38575 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Upk2P38575 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Upk2P38575 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Upk2P38575 Gm10478-201ENSMUST00000084451 396 ntBASIC10.75□□□□□ -0.69
Upk2P38575 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Upk2P38575 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
Upk2P38575 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Upk2P38575 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Upk2P38575 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Upk2P38575 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Upk2P38575 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Upk2P38575 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Upk2P38575 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC10.75□□□□□ -0.69
Upk2P38575 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Upk2P38575 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Upk2P38575 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Upk2P38575 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Upk2P38575 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC10.75□□□□□ -0.69
Upk2P38575 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Upk2P38575 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Upk2P38575 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Upk2P38575 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Upk2P38575 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms