Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.3■□□□□ 0.04
NELFEP18615 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.3■□□□□ 0.04
NELFEP18615 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.3■□□□□ 0.04
NELFEP18615 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.3■□□□□ 0.04
NELFEP18615 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
NELFEP18615 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NELFEP18615 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.3■□□□□ 0.04
NELFEP18615 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
NELFEP18615 TIMM17BP1-201ENST00000545713 516 ntBASIC15.3■□□□□ 0.04
NELFEP18615 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.3■□□□□ 0.04
NELFEP18615 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
NELFEP18615 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.3■□□□□ 0.04
NELFEP18615 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.3■□□□□ 0.04
NELFEP18615 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
NELFEP18615 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.3■□□□□ 0.04
NELFEP18615 CHCHD2P3-201ENST00000603038 451 ntBASIC15.3■□□□□ 0.04
NELFEP18615 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NELFEP18615 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.3■□□□□ 0.04
NELFEP18615 OR2I1P-210ENST00000642037 4691 ntBASIC15.3■□□□□ 0.04
NELFEP18615 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
NELFEP18615 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.3■□□□□ 0.04
NELFEP18615 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.3■□□□□ 0.04
NELFEP18615 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NELFEP18615 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NELFEP18615 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NELFEP18615 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.29■□□□□ 0.04
NELFEP18615 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
NELFEP18615 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.29■□□□□ 0.04
NELFEP18615 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
NELFEP18615 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NELFEP18615 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.29■□□□□ 0.04
NELFEP18615 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.29■□□□□ 0.04
NELFEP18615 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NELFEP18615 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
NELFEP18615 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
NELFEP18615 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
NELFEP18615 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
NELFEP18615 Z97205.2-201ENST00000564697 1639 ntBASIC15.29■□□□□ 0.04
NELFEP18615 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NELFEP18615 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NELFEP18615 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NELFEP18615 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NELFEP18615 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NELFEP18615 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.29■□□□□ 0.04
NELFEP18615 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
NELFEP18615 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NELFEP18615 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NELFEP18615 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.29■□□□□ 0.04
NELFEP18615 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NELFEP18615 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.29■□□□□ 0.04
NELFEP18615 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.29■□□□□ 0.04
NELFEP18615 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NELFEP18615 AL589987.1-201ENST00000453380 819 ntBASIC15.29■□□□□ 0.04
NELFEP18615 AC023310.3-201ENST00000557027 670 ntBASIC15.29■□□□□ 0.04
NELFEP18615 AC100756.1-201ENST00000562736 682 ntBASIC15.29■□□□□ 0.04
NELFEP18615 AC138749.3-201ENST00000567691 622 ntBASIC15.29■□□□□ 0.04
NELFEP18615 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NELFEP18615 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.29■□□□□ 0.04
NELFEP18615 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NELFEP18615 AC099568.2-201ENST00000609194 695 ntBASIC15.29■□□□□ 0.04
NELFEP18615 AC116165.1-201ENST00000611806 668 ntBASIC15.29■□□□□ 0.04
NELFEP18615 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.29■□□□□ 0.04
NELFEP18615 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.29■□□□□ 0.04
NELFEP18615 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NELFEP18615 LINC00528-201ENST00000600723 2160 ntBASIC15.29■□□□□ 0.04
NELFEP18615 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NELFEP18615 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
NELFEP18615 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.29■□□□□ 0.04
NELFEP18615 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.29■□□□□ 0.04
NELFEP18615 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
NELFEP18615 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NELFEP18615 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
NELFEP18615 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NELFEP18615 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NELFEP18615 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
NELFEP18615 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NELFEP18615 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NELFEP18615 AC020658.6-201ENST00000623564 1870 ntBASIC15.29■□□□□ 0.04
NELFEP18615 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.29■□□□□ 0.04
NELFEP18615 LINC00552-201ENST00000625151 2579 ntBASIC15.29■□□□□ 0.04
NELFEP18615 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
NELFEP18615 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
NELFEP18615 BNIP3P1-202ENST00000550043 1585 ntBASIC15.28■□□□□ 0.04
NELFEP18615 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
NELFEP18615 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NELFEP18615 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NELFEP18615 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
NELFEP18615 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NELFEP18615 AC138969.3-201ENST00000546612 1459 ntBASIC15.28■□□□□ 0.04
NELFEP18615 AC138932.2-201ENST00000548268 1459 ntBASIC15.28■□□□□ 0.04
NELFEP18615 AC126755.4-201ENST00000549796 1459 ntBASIC15.28■□□□□ 0.04
NELFEP18615 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NELFEP18615 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.28■□□□□ 0.04
NELFEP18615 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NELFEP18615 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NELFEP18615 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.28■□□□□ 0.04
NELFEP18615 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
NELFEP18615 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NELFEP18615 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
NELFEP18615 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms