Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC9.97□□□□□ -0.81
Cdx1P18111 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx1P18111 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC9.97□□□□□ -0.81
Cdx1P18111 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx1P18111 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC9.97□□□□□ -0.81
Cdx1P18111 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx1P18111 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Cdx1P18111 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx1P18111 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx1P18111 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Cdx1P18111 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx1P18111 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx1P18111 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx1P18111 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx1P18111 Gm2238-201ENSMUST00000192074 3669 ntBASIC9.97□□□□□ -0.81
Cdx1P18111 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx1P18111 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx1P18111 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx1P18111 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx1P18111 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx1P18111 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx1P18111 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Cdx1P18111 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Cdx1P18111 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx1P18111 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx1P18111 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Cdx1P18111 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cdx1P18111 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cdx1P18111 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Cdx1P18111 Gm38037-201ENSMUST00000192600 1624 ntBASIC9.96□□□□□ -0.81
Cdx1P18111 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cdx1P18111 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cdx1P18111 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cdx1P18111 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.81
Cdx1P18111 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cdx1P18111 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC9.96□□□□□ -0.81
Cdx1P18111 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cdx1P18111 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cdx1P18111 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cdx1P18111 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cdx1P18111 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Cdx1P18111 Gm12928-201ENSMUST00000117115 573 ntBASIC9.96□□□□□ -0.82
Cdx1P18111 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC9.96□□□□□ -0.82
Cdx1P18111 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC9.96□□□□□ -0.82
Cdx1P18111 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cdx1P18111 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Cdx1P18111 Ighv1-51-201ENSMUST00000192903 354 ntBASIC9.96□□□□□ -0.82
Cdx1P18111 Gm38319-201ENSMUST00000194537 1266 ntBASIC9.96□□□□□ -0.82
Cdx1P18111 Gm7067-201ENSMUST00000207698 1249 ntBASIC9.96□□□□□ -0.82
Cdx1P18111 Gm8463-201ENSMUST00000208573 613 ntBASIC9.96□□□□□ -0.82
Cdx1P18111 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Cdx1P18111 AC159376.1-201ENSMUST00000218504 630 ntBASIC9.96□□□□□ -0.82
Cdx1P18111 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC9.96□□□□□ -0.82
Cdx1P18111 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC9.96□□□□□ -0.82
Cdx1P18111 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Cdx1P18111 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cdx1P18111 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cdx1P18111 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Cdx1P18111 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cdx1P18111 Gm5912-201ENSMUST00000122282 1438 ntBASIC9.96□□□□□ -0.82
Cdx1P18111 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cdx1P18111 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cdx1P18111 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Cdx1P18111 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Cdx1P18111 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Cdx1P18111 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cdx1P18111 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Cdx1P18111 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cdx1P18111 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cdx1P18111 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cdx1P18111 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Cdx1P18111 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Cdx1P18111 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cdx1P18111 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC9.95□□□□□ -0.82
Cdx1P18111 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Cdx1P18111 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cdx1P18111 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cdx1P18111 Gm26660-202ENSMUST00000223620 4112 ntBASIC9.95□□□□□ -0.82
Cdx1P18111 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC9.95□□□□□ -0.82
Cdx1P18111 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cdx1P18111 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cdx1P18111 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cdx1P18111 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cdx1P18111 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cdx1P18111 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cdx1P18111 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Cdx1P18111 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cdx1P18111 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Cdx1P18111 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cdx1P18111 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Cdx1P18111 Gm11557-201ENSMUST00000120200 1008 ntBASIC9.95□□□□□ -0.82
Cdx1P18111 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC9.95□□□□□ -0.82
Cdx1P18111 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC9.95□□□□□ -0.82
Cdx1P18111 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC9.95□□□□□ -0.82
Cdx1P18111 Gm8927-201ENSMUST00000181978 981 ntBASIC9.95□□□□□ -0.82
Cdx1P18111 Gm6007-201ENSMUST00000208170 823 ntBASIC9.95□□□□□ -0.82
Cdx1P18111 CT010486.3-201ENSMUST00000224555 811 ntBASIC9.95□□□□□ -0.82
Cdx1P18111 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Cdx1P18111 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cdx1P18111 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms