Protein–RNA interactions for Protein: P07309

Ttr, Transthyretin, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TtrP07309 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC8.87□□□□□ -0.99
TtrP07309 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
TtrP07309 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
TtrP07309 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
TtrP07309 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
TtrP07309 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
TtrP07309 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
TtrP07309 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
TtrP07309 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
TtrP07309 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
TtrP07309 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
TtrP07309 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
TtrP07309 CT009713.10-201ENSMUST00000225013 1986 ntBASIC8.87□□□□□ -0.99
TtrP07309 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
TtrP07309 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
TtrP07309 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
TtrP07309 Gm12384-201ENSMUST00000119228 919 ntBASIC8.87□□□□□ -0.99
TtrP07309 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC8.87□□□□□ -0.99
TtrP07309 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC8.87□□□□□ -0.99
TtrP07309 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
TtrP07309 Mir6956-201ENSMUST00000183598 62 ntBASIC8.87□□□□□ -0.99
TtrP07309 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC8.87□□□□□ -0.99
TtrP07309 Gm42929-201ENSMUST00000198374 1286 ntBASIC8.87□□□□□ -0.99
TtrP07309 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC8.87□□□□□ -0.99
TtrP07309 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC8.87□□□□□ -0.99
TtrP07309 AC125117.1-201ENSMUST00000228121 468 ntBASIC8.87□□□□□ -0.99
TtrP07309 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
TtrP07309 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC8.87□□□□□ -0.99
TtrP07309 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC8.87□□□□□ -0.99
TtrP07309 Gm14132-201ENSMUST00000117188 1719 ntBASIC8.87□□□□□ -0.99
TtrP07309 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
TtrP07309 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC8.87□□□□□ -0.99
TtrP07309 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
TtrP07309 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC8.87□□□□□ -0.99
TtrP07309 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
TtrP07309 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
TtrP07309 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
TtrP07309 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
TtrP07309 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
TtrP07309 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
TtrP07309 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
TtrP07309 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
TtrP07309 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
TtrP07309 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
TtrP07309 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
TtrP07309 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
TtrP07309 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
TtrP07309 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC8.87□□□□□ -0.99
TtrP07309 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
TtrP07309 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
TtrP07309 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC8.87□□□□□ -0.99
TtrP07309 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
TtrP07309 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
TtrP07309 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC8.87□□□□□ -0.99
TtrP07309 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
TtrP07309 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC8.87□□□□□ -0.99
TtrP07309 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
TtrP07309 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
TtrP07309 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
TtrP07309 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
TtrP07309 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
TtrP07309 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
TtrP07309 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
TtrP07309 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
TtrP07309 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC8.86□□□□□ -0.99
TtrP07309 AC160410.1-201ENSMUST00000219298 1972 ntBASIC8.86□□□□□ -0.99
TtrP07309 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
TtrP07309 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
TtrP07309 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
TtrP07309 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
TtrP07309 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC8.86□□□□□ -0.99
TtrP07309 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
TtrP07309 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
TtrP07309 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
TtrP07309 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC8.86□□□□□ -0.99
TtrP07309 Gm5863-201ENSMUST00000121760 1008 ntBASIC8.86□□□□□ -0.99
TtrP07309 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC8.86□□□□□ -0.99
TtrP07309 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
TtrP07309 Gm26185-201ENSMUST00000157692 266 ntBASIC8.86□□□□□ -0.99
TtrP07309 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC8.86□□□□□ -0.99
TtrP07309 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
TtrP07309 Gm28631-201ENSMUST00000190740 334 ntBASIC8.86□□□□□ -0.99
TtrP07309 Gm5276-201ENSMUST00000196683 1047 ntBASIC8.86□□□□□ -0.99
TtrP07309 AC165260.3-202ENSMUST00000224550 1031 ntBASIC8.86□□□□□ -0.99
TtrP07309 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
TtrP07309 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
TtrP07309 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
TtrP07309 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
TtrP07309 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
TtrP07309 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
TtrP07309 AC211878.3-201ENSMUST00000222629 2018 ntBASIC8.86□□□□□ -0.99
TtrP07309 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC8.86□□□□□ -0.99
TtrP07309 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
TtrP07309 AC130671.2-201ENSMUST00000227224 1621 ntBASIC8.86□□□□□ -0.99
TtrP07309 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
TtrP07309 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC8.86□□□□□ -0.99
TtrP07309 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
TtrP07309 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
TtrP07309 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
TtrP07309 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms