Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
P06344 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
P06344 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
P06344 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
P06344 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
P06344 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
P06344 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC10.96□□□□□ -0.65
P06344 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
P06344 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
P06344 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
P06344 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
P06344 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
P06344 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC10.96□□□□□ -0.65
P06344 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC10.96□□□□□ -0.65
P06344 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
P06344 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
P06344 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC10.96□□□□□ -0.65
P06344 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
P06344 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
P06344 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
P06344 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
P06344 Gm9083-201ENSMUST00000120423 819 ntBASIC10.96□□□□□ -0.65
P06344 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC10.96□□□□□ -0.65
P06344 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
P06344 Gm2383-201ENSMUST00000181461 807 ntBASIC10.96□□□□□ -0.65
P06344 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC10.96□□□□□ -0.65
P06344 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
P06344 Gm9678-201ENSMUST00000198979 1149 ntBASIC10.96□□□□□ -0.65
P06344 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC10.96□□□□□ -0.65
P06344 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC10.96□□□□□ -0.65
P06344 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC10.96□□□□□ -0.65
P06344 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC10.96□□□□□ -0.65
P06344 CT573034.1-201ENSMUST00000222983 313 ntBASIC10.96□□□□□ -0.65
P06344 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
P06344 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
P06344 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
P06344 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
P06344 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
P06344 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
P06344 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
P06344 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
P06344 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
P06344 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
P06344 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
P06344 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
P06344 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
P06344 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
P06344 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
P06344 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.66
P06344 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
P06344 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
P06344 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
P06344 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
P06344 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
P06344 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P06344 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
P06344 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
P06344 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
P06344 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
P06344 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P06344 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P06344 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
P06344 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
P06344 Mbnl2-204ENSMUST00000227012 2390 ntBASIC10.95□□□□□ -0.66
P06344 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P06344 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
P06344 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P06344 Gm7993-201ENSMUST00000200970 1384 ntBASIC10.95□□□□□ -0.66
P06344 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P06344 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P06344 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P06344 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P06344 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC10.95□□□□□ -0.66
P06344 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC10.95□□□□□ -0.66
P06344 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC10.95□□□□□ -0.66
P06344 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
P06344 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC10.95□□□□□ -0.66
P06344 Gm29199-201ENSMUST00000187766 775 ntBASIC10.95□□□□□ -0.66
P06344 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC10.95□□□□□ -0.66
P06344 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC10.95□□□□□ -0.66
P06344 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC10.95□□□□□ -0.66
P06344 Gm44958-201ENSMUST00000203734 736 ntBASIC10.95□□□□□ -0.66
P06344 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC10.95□□□□□ -0.66
P06344 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC10.95□□□□□ -0.66
P06344 Gm45691-201ENSMUST00000206905 1120 ntBASIC10.95□□□□□ -0.66
P06344 Gm44651-201ENSMUST00000207343 372 ntBASIC10.95□□□□□ -0.66
P06344 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC10.95□□□□□ -0.66
P06344 Gzmn-202ENSMUST00000225535 989 ntBASIC10.95□□□□□ -0.66
P06344 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC10.95□□□□□ -0.66
P06344 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P06344 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P06344 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P06344 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
P06344 Mir433-201ENSMUST00000093564 124 ntBASIC10.95□□□□□ -0.66
P06344 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
P06344 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P06344 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P06344 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
P06344 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
P06344 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms