Protein–RNA interactions for Protein: P01139

Ngf, Beta-nerve growth factor, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NgfP01139 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
NgfP01139 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
NgfP01139 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NgfP01139 Gm14460-201ENSMUST00000121511 639 ntBASIC10.81□□□□□ -0.68
NgfP01139 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC10.81□□□□□ -0.68
NgfP01139 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC10.81□□□□□ -0.68
NgfP01139 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NgfP01139 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
NgfP01139 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
NgfP01139 Gm27438-201ENSMUST00000183480 110 ntBASIC10.81□□□□□ -0.68
NgfP01139 Gm4034-201ENSMUST00000187674 480 ntBASIC10.81□□□□□ -0.68
NgfP01139 Gm38228-201ENSMUST00000193169 1293 ntBASIC10.81□□□□□ -0.68
NgfP01139 Gm17831-201ENSMUST00000205579 900 ntBASIC10.81□□□□□ -0.68
NgfP01139 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC10.81□□□□□ -0.68
NgfP01139 AC098716.1-201ENSMUST00000213527 703 ntBASIC10.81□□□□□ -0.68
NgfP01139 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NgfP01139 Gm4797-201ENSMUST00000219075 1283 ntBASIC10.81□□□□□ -0.68
NgfP01139 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NgfP01139 CT009713.8-202ENSMUST00000224732 385 ntBASIC10.81□□□□□ -0.68
NgfP01139 AC134860.1-201ENSMUST00000224867 660 ntBASIC10.81□□□□□ -0.68
NgfP01139 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NgfP01139 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
NgfP01139 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NgfP01139 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
NgfP01139 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NgfP01139 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NgfP01139 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC10.81□□□□□ -0.68
NgfP01139 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
NgfP01139 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
NgfP01139 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NgfP01139 Gm38346-201ENSMUST00000192379 2639 ntBASIC10.81□□□□□ -0.68
NgfP01139 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NgfP01139 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NgfP01139 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NgfP01139 AC173482.6-201ENSMUST00000225889 1741 ntBASIC10.81□□□□□ -0.68
NgfP01139 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NgfP01139 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
NgfP01139 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NgfP01139 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
NgfP01139 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
NgfP01139 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NgfP01139 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NgfP01139 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
NgfP01139 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
NgfP01139 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
NgfP01139 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
NgfP01139 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
NgfP01139 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NgfP01139 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NgfP01139 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
NgfP01139 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC10.8□□□□□ -0.68
NgfP01139 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
NgfP01139 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
NgfP01139 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NgfP01139 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
NgfP01139 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
NgfP01139 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
NgfP01139 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NgfP01139 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
NgfP01139 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
NgfP01139 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC10.8□□□□□ -0.68
NgfP01139 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NgfP01139 Gm15004-201ENSMUST00000119192 630 ntBASIC10.8□□□□□ -0.68
NgfP01139 Gm15595-201ENSMUST00000120840 961 ntBASIC10.8□□□□□ -0.68
NgfP01139 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC10.8□□□□□ -0.68
NgfP01139 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC10.8□□□□□ -0.68
NgfP01139 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
NgfP01139 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC10.8□□□□□ -0.68
NgfP01139 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC10.8□□□□□ -0.68
NgfP01139 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC10.8□□□□□ -0.68
NgfP01139 Gm8815-201ENSMUST00000173809 620 ntBASIC10.8□□□□□ -0.68
NgfP01139 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC10.8□□□□□ -0.68
NgfP01139 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
NgfP01139 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC10.8□□□□□ -0.68
NgfP01139 Gm45575-201ENSMUST00000210283 548 ntBASIC10.8□□□□□ -0.68
NgfP01139 Gm45398-201ENSMUST00000210561 165 ntBASIC10.8□□□□□ -0.68
NgfP01139 Gm7395-201ENSMUST00000216059 1045 ntBASIC10.8□□□□□ -0.68
NgfP01139 AC153937.1-201ENSMUST00000218734 412 ntBASIC10.8□□□□□ -0.68
NgfP01139 Gm6781-201ENSMUST00000038304 1242 ntBASIC10.8□□□□□ -0.68
NgfP01139 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NgfP01139 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
NgfP01139 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
NgfP01139 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC10.8□□□□□ -0.68
NgfP01139 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
NgfP01139 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
NgfP01139 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
NgfP01139 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NgfP01139 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
NgfP01139 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
NgfP01139 AC241621.2-201ENSMUST00000223991 2151 ntBASIC10.8□□□□□ -0.68
NgfP01139 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NgfP01139 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
NgfP01139 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC10.8□□□□□ -0.68
NgfP01139 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
NgfP01139 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
NgfP01139 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
NgfP01139 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
NgfP01139 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NgfP01139 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
NgfP01139 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms