Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Ldb2O55203 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ldb2O55203 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Ldb2O55203 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ldb2O55203 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ldb2O55203 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ldb2O55203 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ldb2O55203 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.2□□□□□ -0.46
Ldb2O55203 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.2□□□□□ -0.46
Ldb2O55203 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ldb2O55203 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ldb2O55203 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ldb2O55203 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ldb2O55203 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ldb2O55203 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ldb2O55203 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.2□□□□□ -0.46
Ldb2O55203 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ldb2O55203 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ldb2O55203 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ldb2O55203 Gm23270-201ENSMUST00000104055 131 ntBASIC12.2□□□□□ -0.46
Ldb2O55203 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ldb2O55203 Gm14726-201ENSMUST00000120623 896 ntBASIC12.2□□□□□ -0.46
Ldb2O55203 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.2□□□□□ -0.46
Ldb2O55203 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ldb2O55203 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Ldb2O55203 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ldb2O55203 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Ldb2O55203 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ldb2O55203 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.2□□□□□ -0.46
Ldb2O55203 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.2□□□□□ -0.46
Ldb2O55203 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ldb2O55203 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ldb2O55203 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.2□□□□□ -0.46
Ldb2O55203 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ldb2O55203 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ldb2O55203 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ldb2O55203 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ldb2O55203 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.2□□□□□ -0.46
Ldb2O55203 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ldb2O55203 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ldb2O55203 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Ldb2O55203 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Ldb2O55203 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ldb2O55203 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ldb2O55203 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ldb2O55203 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Ldb2O55203 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Ldb2O55203 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ldb2O55203 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ldb2O55203 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Ldb2O55203 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ldb2O55203 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ldb2O55203 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ldb2O55203 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ldb2O55203 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ldb2O55203 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ldb2O55203 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ldb2O55203 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ldb2O55203 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ldb2O55203 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ldb2O55203 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ldb2O55203 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.19□□□□□ -0.46
Ldb2O55203 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ldb2O55203 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ldb2O55203 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ldb2O55203 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ldb2O55203 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ldb2O55203 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.19□□□□□ -0.46
Ldb2O55203 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Ldb2O55203 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ldb2O55203 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ldb2O55203 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ldb2O55203 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.19□□□□□ -0.46
Ldb2O55203 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ldb2O55203 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.19□□□□□ -0.46
Ldb2O55203 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.19□□□□□ -0.46
Ldb2O55203 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ldb2O55203 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ldb2O55203 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Ldb2O55203 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Ldb2O55203 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ldb2O55203 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ldb2O55203 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ldb2O55203 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ldb2O55203 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ldb2O55203 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ldb2O55203 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ldb2O55203 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.19□□□□□ -0.46
Ldb2O55203 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ldb2O55203 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ldb2O55203 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ldb2O55203 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ldb2O55203 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ldb2O55203 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ldb2O55203 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ldb2O55203 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ldb2O55203 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ldb2O55203 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ldb2O55203 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ldb2O55203 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms