Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm25668-201ENSMUST00000157700 129 ntBASIC11.82□□□□□ -0.52
Upk3aQ9JKX8 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.82□□□□□ -0.52
Upk3aQ9JKX8 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.82□□□□□ -0.52
Upk3aQ9JKX8 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.82□□□□□ -0.52
Upk3aQ9JKX8 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.82□□□□□ -0.52
Upk3aQ9JKX8 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Upk3aQ9JKX8 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Upk3aQ9JKX8 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Upk3aQ9JKX8 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Upk3aQ9JKX8 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Upk3aQ9JKX8 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Upk3aQ9JKX8 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Upk3aQ9JKX8 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Upk3aQ9JKX8 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Upk3aQ9JKX8 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Upk3aQ9JKX8 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Upk3aQ9JKX8 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Upk3aQ9JKX8 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Upk3aQ9JKX8 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Upk3aQ9JKX8 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.82□□□□□ -0.52
Upk3aQ9JKX8 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Upk3aQ9JKX8 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Upk3aQ9JKX8 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Upk3aQ9JKX8 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Upk3aQ9JKX8 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Upk3aQ9JKX8 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.82□□□□□ -0.52
Upk3aQ9JKX8 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Upk3aQ9JKX8 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Upk3aQ9JKX8 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Upk3aQ9JKX8 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Upk3aQ9JKX8 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Upk3aQ9JKX8 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Upk3aQ9JKX8 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Upk3aQ9JKX8 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Upk3aQ9JKX8 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Upk3aQ9JKX8 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Upk3aQ9JKX8 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Upk3aQ9JKX8 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Upk3aQ9JKX8 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Upk3aQ9JKX8 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Upk3aQ9JKX8 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Upk3aQ9JKX8 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.81□□□□□ -0.52
Upk3aQ9JKX8 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Upk3aQ9JKX8 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Upk3aQ9JKX8 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Upk3aQ9JKX8 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Upk3aQ9JKX8 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Upk3aQ9JKX8 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Upk3aQ9JKX8 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Upk3aQ9JKX8 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Upk3aQ9JKX8 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Upk3aQ9JKX8 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.81□□□□□ -0.52
Upk3aQ9JKX8 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Upk3aQ9JKX8 Gm11989-201ENSMUST00000117240 672 ntBASIC11.81□□□□□ -0.52
Upk3aQ9JKX8 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Upk3aQ9JKX8 Gm11362-201ENSMUST00000118838 850 ntBASIC11.81□□□□□ -0.52
Upk3aQ9JKX8 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Upk3aQ9JKX8 Mir6420-201ENSMUST00000185032 102 ntBASIC11.81□□□□□ -0.52
Upk3aQ9JKX8 Rprl1-202ENSMUST00000198476 238 ntBASIC11.81□□□□□ -0.52
Upk3aQ9JKX8 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.81□□□□□ -0.52
Upk3aQ9JKX8 Gm44967-201ENSMUST00000207047 631 ntBASIC11.81□□□□□ -0.52
Upk3aQ9JKX8 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.81□□□□□ -0.52
Upk3aQ9JKX8 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Upk3aQ9JKX8 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Upk3aQ9JKX8 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Upk3aQ9JKX8 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Upk3aQ9JKX8 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Upk3aQ9JKX8 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Upk3aQ9JKX8 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Upk3aQ9JKX8 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.81□□□□□ -0.52
Upk3aQ9JKX8 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Upk3aQ9JKX8 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Upk3aQ9JKX8 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Upk3aQ9JKX8 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Upk3aQ9JKX8 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Upk3aQ9JKX8 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Upk3aQ9JKX8 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Upk3aQ9JKX8 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Upk3aQ9JKX8 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Upk3aQ9JKX8 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.8□□□□□ -0.52
Upk3aQ9JKX8 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Upk3aQ9JKX8 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Upk3aQ9JKX8 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Upk3aQ9JKX8 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Upk3aQ9JKX8 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Upk3aQ9JKX8 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Upk3aQ9JKX8 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Upk3aQ9JKX8 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Upk3aQ9JKX8 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Upk3aQ9JKX8 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Upk3aQ9JKX8 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.8□□□□□ -0.52
Upk3aQ9JKX8 Gm7722-201ENSMUST00000120646 741 ntBASIC11.8□□□□□ -0.52
Upk3aQ9JKX8 Gm12164-201ENSMUST00000121695 551 ntBASIC11.8□□□□□ -0.52
Upk3aQ9JKX8 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Upk3aQ9JKX8 Gm32999-201ENSMUST00000192693 562 ntBASIC11.8□□□□□ -0.52
Upk3aQ9JKX8 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC11.8□□□□□ -0.52
Upk3aQ9JKX8 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.8□□□□□ -0.52
Upk3aQ9JKX8 Gm45598-202ENSMUST00000210719 986 ntBASIC11.8□□□□□ -0.52
Upk3aQ9JKX8 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.8□□□□□ -0.52
Upk3aQ9JKX8 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms