Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Tubb3Q9ERD7 Gm24548-201ENSMUST00000158650 108 ntBASIC12.24□□□□□ -0.45
Tubb3Q9ERD7 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.24□□□□□ -0.45
Tubb3Q9ERD7 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tubb3Q9ERD7 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Tubb3Q9ERD7 Gm8738-201ENSMUST00000172606 329 ntBASIC12.24□□□□□ -0.45
Tubb3Q9ERD7 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tubb3Q9ERD7 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tubb3Q9ERD7 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Tubb3Q9ERD7 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tubb3Q9ERD7 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Tubb3Q9ERD7 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.24□□□□□ -0.45
Tubb3Q9ERD7 Gm45865-201ENSMUST00000211815 945 ntBASIC12.24□□□□□ -0.45
Tubb3Q9ERD7 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Tubb3Q9ERD7 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Tubb3Q9ERD7 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Tubb3Q9ERD7 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.24□□□□□ -0.45
Tubb3Q9ERD7 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.24□□□□□ -0.45
Tubb3Q9ERD7 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tubb3Q9ERD7 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tubb3Q9ERD7 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.24□□□□□ -0.45
Tubb3Q9ERD7 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tubb3Q9ERD7 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tubb3Q9ERD7 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Tubb3Q9ERD7 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tubb3Q9ERD7 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tubb3Q9ERD7 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tubb3Q9ERD7 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Tubb3Q9ERD7 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tubb3Q9ERD7 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tubb3Q9ERD7 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Tubb3Q9ERD7 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tubb3Q9ERD7 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tubb3Q9ERD7 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Tubb3Q9ERD7 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tubb3Q9ERD7 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tubb3Q9ERD7 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tubb3Q9ERD7 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tubb3Q9ERD7 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tubb3Q9ERD7 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tubb3Q9ERD7 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tubb3Q9ERD7 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tubb3Q9ERD7 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tubb3Q9ERD7 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tubb3Q9ERD7 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.23□□□□□ -0.45
Tubb3Q9ERD7 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tubb3Q9ERD7 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.23□□□□□ -0.45
Tubb3Q9ERD7 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tubb3Q9ERD7 Gm13297-201ENSMUST00000120205 934 ntBASIC12.23□□□□□ -0.45
Tubb3Q9ERD7 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.23□□□□□ -0.45
Tubb3Q9ERD7 Gm22121-201ENSMUST00000175148 54 ntBASIC12.23□□□□□ -0.45
Tubb3Q9ERD7 Gm6621-201ENSMUST00000193251 772 ntBASIC12.23□□□□□ -0.45
Tubb3Q9ERD7 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.23□□□□□ -0.45
Tubb3Q9ERD7 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.23□□□□□ -0.45
Tubb3Q9ERD7 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tubb3Q9ERD7 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tubb3Q9ERD7 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Tubb3Q9ERD7 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.23□□□□□ -0.45
Tubb3Q9ERD7 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tubb3Q9ERD7 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tubb3Q9ERD7 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tubb3Q9ERD7 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tubb3Q9ERD7 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Tubb3Q9ERD7 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tubb3Q9ERD7 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tubb3Q9ERD7 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tubb3Q9ERD7 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Tubb3Q9ERD7 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tubb3Q9ERD7 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tubb3Q9ERD7 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Tubb3Q9ERD7 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tubb3Q9ERD7 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.22□□□□□ -0.45
Tubb3Q9ERD7 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Tubb3Q9ERD7 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Tubb3Q9ERD7 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Tubb3Q9ERD7 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tubb3Q9ERD7 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.22□□□□□ -0.45
Tubb3Q9ERD7 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tubb3Q9ERD7 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tubb3Q9ERD7 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Tubb3Q9ERD7 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tubb3Q9ERD7 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Tubb3Q9ERD7 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Tubb3Q9ERD7 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Tubb3Q9ERD7 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.22□□□□□ -0.45
Tubb3Q9ERD7 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.22□□□□□ -0.45
Tubb3Q9ERD7 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tubb3Q9ERD7 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.22□□□□□ -0.45
Tubb3Q9ERD7 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.22□□□□□ -0.45
Tubb3Q9ERD7 Gm12502-201ENSMUST00000120197 444 ntBASIC12.22□□□□□ -0.45
Tubb3Q9ERD7 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tubb3Q9ERD7 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Tubb3Q9ERD7 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.22□□□□□ -0.45
Tubb3Q9ERD7 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.22□□□□□ -0.45
Tubb3Q9ERD7 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.22□□□□□ -0.45
Tubb3Q9ERD7 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Tubb3Q9ERD7 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Tubb3Q9ERD7 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Tubb3Q9ERD7 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.22□□□□□ -0.45
Tubb3Q9ERD7 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms