Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Stag1Q9D3E6 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Stag1Q9D3E6 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Stag1Q9D3E6 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Stag1Q9D3E6 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Stag1Q9D3E6 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Stag1Q9D3E6 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
Stag1Q9D3E6 Gm9211-201ENSMUST00000182882 975 ntBASIC14.66□□□□□ -0.06
Stag1Q9D3E6 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC14.66□□□□□ -0.06
Stag1Q9D3E6 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC14.66□□□□□ -0.06
Stag1Q9D3E6 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC14.66□□□□□ -0.06
Stag1Q9D3E6 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Stag1Q9D3E6 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Stag1Q9D3E6 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Stag1Q9D3E6 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Stag1Q9D3E6 Gm44414-201ENSMUST00000203660 2109 ntBASIC14.66□□□□□ -0.06
Stag1Q9D3E6 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Stag1Q9D3E6 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Stag1Q9D3E6 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Stag1Q9D3E6 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Stag1Q9D3E6 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Stag1Q9D3E6 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
Stag1Q9D3E6 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Stag1Q9D3E6 AC159195.1-201ENSMUST00000225867 2086 ntBASIC14.65□□□□□ -0.06
Stag1Q9D3E6 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Stag1Q9D3E6 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Stag1Q9D3E6 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Stag1Q9D3E6 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Stag1Q9D3E6 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Stag1Q9D3E6 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Stag1Q9D3E6 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Stag1Q9D3E6 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Stag1Q9D3E6 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC14.65□□□□□ -0.06
Stag1Q9D3E6 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Stag1Q9D3E6 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Stag1Q9D3E6 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Stag1Q9D3E6 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Stag1Q9D3E6 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC14.65□□□□□ -0.06
Stag1Q9D3E6 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC14.65□□□□□ -0.06
Stag1Q9D3E6 Rprl1-201ENSMUST00000158050 327 ntBASIC14.65□□□□□ -0.06
Stag1Q9D3E6 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Stag1Q9D3E6 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC14.65□□□□□ -0.06
Stag1Q9D3E6 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Stag1Q9D3E6 Gm7207-201ENSMUST00000211575 1067 ntBASIC14.65□□□□□ -0.06
Stag1Q9D3E6 Olfr1347-205ENSMUST00000220413 964 ntBASIC14.65□□□□□ -0.06
Stag1Q9D3E6 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Stag1Q9D3E6 Gm21811-201ENSMUST00000096485 930 ntBASIC14.65□□□□□ -0.06
Stag1Q9D3E6 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Stag1Q9D3E6 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Stag1Q9D3E6 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Stag1Q9D3E6 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Stag1Q9D3E6 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Stag1Q9D3E6 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Stag1Q9D3E6 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Stag1Q9D3E6 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Stag1Q9D3E6 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Stag1Q9D3E6 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Stag1Q9D3E6 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Stag1Q9D3E6 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Stag1Q9D3E6 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC14.65□□□□□ -0.07
Stag1Q9D3E6 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Stag1Q9D3E6 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Stag1Q9D3E6 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Stag1Q9D3E6 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Stag1Q9D3E6 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Stag1Q9D3E6 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Stag1Q9D3E6 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Stag1Q9D3E6 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Stag1Q9D3E6 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Stag1Q9D3E6 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Stag1Q9D3E6 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Stag1Q9D3E6 Gm14058-201ENSMUST00000116082 735 ntBASIC14.64□□□□□ -0.07
Stag1Q9D3E6 Gm13035-201ENSMUST00000117496 342 ntBASIC14.64□□□□□ -0.07
Stag1Q9D3E6 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Stag1Q9D3E6 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Stag1Q9D3E6 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC14.64□□□□□ -0.07
Stag1Q9D3E6 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Stag1Q9D3E6 Ighv4-2-201ENSMUST00000192975 362 ntBASIC14.64□□□□□ -0.07
Stag1Q9D3E6 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC14.64□□□□□ -0.07
Stag1Q9D3E6 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Stag1Q9D3E6 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Stag1Q9D3E6 Gm18393-201ENSMUST00000208349 1131 ntBASIC14.64□□□□□ -0.07
Stag1Q9D3E6 AC153954.1-201ENSMUST00000216959 255 ntBASIC14.64□□□□□ -0.07
Stag1Q9D3E6 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Stag1Q9D3E6 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Stag1Q9D3E6 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Stag1Q9D3E6 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Stag1Q9D3E6 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Stag1Q9D3E6 Gm10702-201ENSMUST00000098929 1268 ntBASIC14.64□□□□□ -0.07
Stag1Q9D3E6 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Stag1Q9D3E6 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Stag1Q9D3E6 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Stag1Q9D3E6 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Stag1Q9D3E6 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Stag1Q9D3E6 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Stag1Q9D3E6 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Stag1Q9D3E6 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC14.64□□□□□ -0.07
Stag1Q9D3E6 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Stag1Q9D3E6 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Stag1Q9D3E6 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms