Protein–RNA interactions for Protein: Q9D394

Rufy3, Protein RUFY3, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rufy3Q9D394 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rufy3Q9D394 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rufy3Q9D394 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rufy3Q9D394 Snora78-201ENSMUST00000158630 128 ntBASIC14.41□□□□□ -0.1
Rufy3Q9D394 Gm5370-201ENSMUST00000187187 574 ntBASIC14.41□□□□□ -0.1
Rufy3Q9D394 Gm37201-201ENSMUST00000191845 523 ntBASIC14.41□□□□□ -0.1
Rufy3Q9D394 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rufy3Q9D394 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rufy3Q9D394 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rufy3Q9D394 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rufy3Q9D394 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Rufy3Q9D394 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Rufy3Q9D394 Gm42829-201ENSMUST00000198417 2585 ntBASIC14.41□□□□□ -0.1
Rufy3Q9D394 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rufy3Q9D394 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC14.41□□□□□ -0.1
Rufy3Q9D394 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rufy3Q9D394 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rufy3Q9D394 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rufy3Q9D394 Gm4366-201ENSMUST00000201488 1342 ntBASIC14.41□□□□□ -0.1
Rufy3Q9D394 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rufy3Q9D394 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rufy3Q9D394 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rufy3Q9D394 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rufy3Q9D394 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rufy3Q9D394 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC14.4□□□□□ -0.1
Rufy3Q9D394 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rufy3Q9D394 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rufy3Q9D394 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rufy3Q9D394 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rufy3Q9D394 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rufy3Q9D394 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rufy3Q9D394 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rufy3Q9D394 Gm13142-201ENSMUST00000117213 1453 ntBASIC14.4□□□□□ -0.1
Rufy3Q9D394 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rufy3Q9D394 Mir1247-201ENSMUST00000116706 82 ntBASIC14.4□□□□□ -0.1
Rufy3Q9D394 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rufy3Q9D394 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC14.4□□□□□ -0.1
Rufy3Q9D394 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC14.4□□□□□ -0.1
Rufy3Q9D394 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rufy3Q9D394 Gm27023-201ENSMUST00000182372 285 ntBASIC14.4□□□□□ -0.1
Rufy3Q9D394 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC14.4□□□□□ -0.1
Rufy3Q9D394 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rufy3Q9D394 Gm19309-201ENSMUST00000218295 205 ntBASIC14.4□□□□□ -0.1
Rufy3Q9D394 Dhrs4-202ENSMUST00000226168 828 ntBASIC14.4□□□□□ -0.1
Rufy3Q9D394 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rufy3Q9D394 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Rufy3Q9D394 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rufy3Q9D394 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rufy3Q9D394 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rufy3Q9D394 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rufy3Q9D394 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rufy3Q9D394 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rufy3Q9D394 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rufy3Q9D394 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rufy3Q9D394 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rufy3Q9D394 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.11
Rufy3Q9D394 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rufy3Q9D394 AC122860.2-201ENSMUST00000217967 2671 ntBASIC14.39□□□□□ -0.11
Rufy3Q9D394 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rufy3Q9D394 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rufy3Q9D394 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Rufy3Q9D394 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Rufy3Q9D394 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rufy3Q9D394 Gm3756-201ENSMUST00000169182 1355 ntBASIC14.39□□□□□ -0.11
Rufy3Q9D394 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rufy3Q9D394 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Rufy3Q9D394 Gm6023-201ENSMUST00000118217 606 ntBASIC14.39□□□□□ -0.11
Rufy3Q9D394 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC14.39□□□□□ -0.11
Rufy3Q9D394 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC14.39□□□□□ -0.11
Rufy3Q9D394 Gm43133-201ENSMUST00000197472 463 ntBASIC14.39□□□□□ -0.11
Rufy3Q9D394 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC14.39□□□□□ -0.11
Rufy3Q9D394 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rufy3Q9D394 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Rufy3Q9D394 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rufy3Q9D394 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rufy3Q9D394 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rufy3Q9D394 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rufy3Q9D394 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Rufy3Q9D394 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rufy3Q9D394 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rufy3Q9D394 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rufy3Q9D394 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rufy3Q9D394 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC14.39□□□□□ -0.11
Rufy3Q9D394 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rufy3Q9D394 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rufy3Q9D394 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rufy3Q9D394 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rufy3Q9D394 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rufy3Q9D394 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rufy3Q9D394 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rufy3Q9D394 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rufy3Q9D394 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rufy3Q9D394 Gm2673-201ENSMUST00000120958 1608 ntBASIC14.38□□□□□ -0.11
Rufy3Q9D394 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rufy3Q9D394 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rufy3Q9D394 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rufy3Q9D394 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC14.38□□□□□ -0.11
Rufy3Q9D394 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rufy3Q9D394 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rufy3Q9D394 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms