Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Retreg3Q9CQV4 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retreg3Q9CQV4 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retreg3Q9CQV4 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Retreg3Q9CQV4 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retreg3Q9CQV4 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Retreg3Q9CQV4 Daam2-202ENSMUST00000224595 1926 ntBASIC12.74□□□□□ -0.37
Retreg3Q9CQV4 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retreg3Q9CQV4 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.74□□□□□ -0.37
Retreg3Q9CQV4 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retreg3Q9CQV4 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.74□□□□□ -0.37
Retreg3Q9CQV4 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.73□□□□□ -0.37
Retreg3Q9CQV4 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg3Q9CQV4 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg3Q9CQV4 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.73□□□□□ -0.37
Retreg3Q9CQV4 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.73□□□□□ -0.37
Retreg3Q9CQV4 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg3Q9CQV4 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg3Q9CQV4 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg3Q9CQV4 Gm18300-201ENSMUST00000192792 1406 ntBASIC12.73□□□□□ -0.37
Retreg3Q9CQV4 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.73□□□□□ -0.37
Retreg3Q9CQV4 Gm43868-201ENSMUST00000205187 2114 ntBASIC12.73□□□□□ -0.37
Retreg3Q9CQV4 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg3Q9CQV4 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg3Q9CQV4 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg3Q9CQV4 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg3Q9CQV4 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg3Q9CQV4 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg3Q9CQV4 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Retreg3Q9CQV4 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.73□□□□□ -0.37
Retreg3Q9CQV4 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg3Q9CQV4 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg3Q9CQV4 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.73□□□□□ -0.37
Retreg3Q9CQV4 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.73□□□□□ -0.37
Retreg3Q9CQV4 Gm35202-201ENSMUST00000130083 712 ntTSL 2 BASIC12.73□□□□□ -0.37
Retreg3Q9CQV4 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.73□□□□□ -0.37
Retreg3Q9CQV4 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC12.73□□□□□ -0.37
Retreg3Q9CQV4 Gm11655-201ENSMUST00000153899 765 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg3Q9CQV4 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg3Q9CQV4 Pou1f1-205ENSMUST00000184525 1020 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg3Q9CQV4 Gm18827-201ENSMUST00000188341 790 ntBASIC12.73□□□□□ -0.37
Retreg3Q9CQV4 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg3Q9CQV4 AC154646.1-201ENSMUST00000225011 1092 ntBASIC12.73□□□□□ -0.37
Retreg3Q9CQV4 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Retreg3Q9CQV4 Gm24526-201ENSMUST00000082921 158 ntBASIC12.73□□□□□ -0.37
Retreg3Q9CQV4 Zfp850-201ENSMUST00000099111 941 ntBASIC12.73□□□□□ -0.37
Retreg3Q9CQV4 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg3Q9CQV4 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg3Q9CQV4 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg3Q9CQV4 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Retreg3Q9CQV4 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg3Q9CQV4 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.73□□□□□ -0.37
Retreg3Q9CQV4 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg3Q9CQV4 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg3Q9CQV4 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg3Q9CQV4 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Retreg3Q9CQV4 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg3Q9CQV4 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg3Q9CQV4 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg3Q9CQV4 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg3Q9CQV4 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg3Q9CQV4 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg3Q9CQV4 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Retreg3Q9CQV4 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg3Q9CQV4 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg3Q9CQV4 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg3Q9CQV4 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retreg3Q9CQV4 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retreg3Q9CQV4 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retreg3Q9CQV4 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retreg3Q9CQV4 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retreg3Q9CQV4 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.72□□□□□ -0.37
Retreg3Q9CQV4 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.72□□□□□ -0.37
Retreg3Q9CQV4 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retreg3Q9CQV4 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retreg3Q9CQV4 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retreg3Q9CQV4 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Retreg3Q9CQV4 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Retreg3Q9CQV4 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.72□□□□□ -0.37
Retreg3Q9CQV4 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.72□□□□□ -0.37
Retreg3Q9CQV4 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.72□□□□□ -0.37
Retreg3Q9CQV4 Gm15703-201ENSMUST00000120250 880 ntBASIC12.72□□□□□ -0.37
Retreg3Q9CQV4 Gm14908-201ENSMUST00000120930 1286 ntBASIC12.72□□□□□ -0.37
Retreg3Q9CQV4 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Retreg3Q9CQV4 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.72□□□□□ -0.37
Retreg3Q9CQV4 Gm20379-201ENSMUST00000188317 1204 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Retreg3Q9CQV4 Gm43491-201ENSMUST00000197133 784 ntBASIC12.72□□□□□ -0.37
Retreg3Q9CQV4 Gm42782-201ENSMUST00000197286 522 ntBASIC12.72□□□□□ -0.37
Retreg3Q9CQV4 Gm43118-201ENSMUST00000199149 775 ntBASIC12.72□□□□□ -0.37
Retreg3Q9CQV4 1700113A16Rik-203ENSMUST00000200006 563 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Retreg3Q9CQV4 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retreg3Q9CQV4 Gm18935-201ENSMUST00000212692 664 ntBASIC12.72□□□□□ -0.37
Retreg3Q9CQV4 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Retreg3Q9CQV4 Gm9368-201ENSMUST00000219348 831 ntBASIC12.72□□□□□ -0.37
Retreg3Q9CQV4 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.72□□□□□ -0.37
Retreg3Q9CQV4 AC133517.2-201ENSMUST00000226820 690 ntBASIC12.72□□□□□ -0.37
Retreg3Q9CQV4 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.72□□□□□ -0.37
Retreg3Q9CQV4 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retreg3Q9CQV4 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retreg3Q9CQV4 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms