Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Rnf8Q8VC56 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Rnf8Q8VC56 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.91□□□□□ -0.5
Rnf8Q8VC56 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rnf8Q8VC56 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.91□□□□□ -0.5
Rnf8Q8VC56 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.91□□□□□ -0.5
Rnf8Q8VC56 Gm37424-201ENSMUST00000191727 561 ntBASIC11.91□□□□□ -0.5
Rnf8Q8VC56 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rnf8Q8VC56 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC11.91□□□□□ -0.5
Rnf8Q8VC56 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.91□□□□□ -0.5
Rnf8Q8VC56 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.91□□□□□ -0.5
Rnf8Q8VC56 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Rnf8Q8VC56 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.91□□□□□ -0.5
Rnf8Q8VC56 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rnf8Q8VC56 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rnf8Q8VC56 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rnf8Q8VC56 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.91□□□□□ -0.5
Rnf8Q8VC56 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rnf8Q8VC56 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Rnf8Q8VC56 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rnf8Q8VC56 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rnf8Q8VC56 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.91□□□□□ -0.5
Rnf8Q8VC56 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rnf8Q8VC56 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Rnf8Q8VC56 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rnf8Q8VC56 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rnf8Q8VC56 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.9□□□□□ -0.5
Rnf8Q8VC56 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rnf8Q8VC56 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.9□□□□□ -0.5
Rnf8Q8VC56 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rnf8Q8VC56 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rnf8Q8VC56 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.9□□□□□ -0.5
Rnf8Q8VC56 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.9□□□□□ -0.5
Rnf8Q8VC56 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Rnf8Q8VC56 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.5
Rnf8Q8VC56 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.9□□□□□ -0.5
Rnf8Q8VC56 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rnf8Q8VC56 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.9□□□□□ -0.5
Rnf8Q8VC56 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Rnf8Q8VC56 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rnf8Q8VC56 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rnf8Q8VC56 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rnf8Q8VC56 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Rnf8Q8VC56 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Rnf8Q8VC56 Gm13813-201ENSMUST00000120998 787 ntBASIC11.9□□□□□ -0.5
Rnf8Q8VC56 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rnf8Q8VC56 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rnf8Q8VC56 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rnf8Q8VC56 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rnf8Q8VC56 Gm37042-201ENSMUST00000193816 581 ntBASIC11.9□□□□□ -0.5
Rnf8Q8VC56 Gm8099-201ENSMUST00000200510 742 ntBASIC11.9□□□□□ -0.5
Rnf8Q8VC56 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.9□□□□□ -0.5
Rnf8Q8VC56 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rnf8Q8VC56 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC11.9□□□□□ -0.5
Rnf8Q8VC56 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.9□□□□□ -0.5
Rnf8Q8VC56 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.9□□□□□ -0.5
Rnf8Q8VC56 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rnf8Q8VC56 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rnf8Q8VC56 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rnf8Q8VC56 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Rnf8Q8VC56 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rnf8Q8VC56 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.9□□□□□ -0.5
Rnf8Q8VC56 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rnf8Q8VC56 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rnf8Q8VC56 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rnf8Q8VC56 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Rnf8Q8VC56 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rnf8Q8VC56 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rnf8Q8VC56 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rnf8Q8VC56 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Rnf8Q8VC56 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.51
Rnf8Q8VC56 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.9□□□□□ -0.51
Rnf8Q8VC56 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.9□□□□□ -0.51
Rnf8Q8VC56 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Rnf8Q8VC56 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Rnf8Q8VC56 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf8Q8VC56 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf8Q8VC56 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf8Q8VC56 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf8Q8VC56 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Rnf8Q8VC56 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf8Q8VC56 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Rnf8Q8VC56 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.89□□□□□ -0.51
Rnf8Q8VC56 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf8Q8VC56 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf8Q8VC56 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf8Q8VC56 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf8Q8VC56 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf8Q8VC56 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.89□□□□□ -0.51
Rnf8Q8VC56 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf8Q8VC56 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf8Q8VC56 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf8Q8VC56 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf8Q8VC56 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Rnf8Q8VC56 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.89□□□□□ -0.51
Rnf8Q8VC56 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Rnf8Q8VC56 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.89□□□□□ -0.51
Rnf8Q8VC56 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf8Q8VC56 Gm7029-201ENSMUST00000173226 450 ntBASIC11.89□□□□□ -0.51
Rnf8Q8VC56 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms