Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
ShfQ8CG80 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC10.96□□□□□ -0.65
ShfQ8CG80 Gm12490-201ENSMUST00000120255 560 ntBASIC10.96□□□□□ -0.65
ShfQ8CG80 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC10.96□□□□□ -0.65
ShfQ8CG80 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
ShfQ8CG80 Gm8738-201ENSMUST00000172606 329 ntBASIC10.96□□□□□ -0.65
ShfQ8CG80 Gm8494-201ENSMUST00000178171 1233 ntBASIC10.96□□□□□ -0.65
ShfQ8CG80 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
ShfQ8CG80 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
ShfQ8CG80 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
ShfQ8CG80 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC10.96□□□□□ -0.65
ShfQ8CG80 Gm39404-201ENSMUST00000216350 313 ntBASIC10.96□□□□□ -0.65
ShfQ8CG80 Gm5781-201ENSMUST00000219792 443 ntBASIC10.96□□□□□ -0.65
ShfQ8CG80 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC10.96□□□□□ -0.65
ShfQ8CG80 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
ShfQ8CG80 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
ShfQ8CG80 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
ShfQ8CG80 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
ShfQ8CG80 n-R5s195-201ENSMUST00000082891 119 ntBASIC10.96□□□□□ -0.65
ShfQ8CG80 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
ShfQ8CG80 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
ShfQ8CG80 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
ShfQ8CG80 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
ShfQ8CG80 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC10.96□□□□□ -0.66
ShfQ8CG80 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
ShfQ8CG80 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
ShfQ8CG80 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
ShfQ8CG80 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
ShfQ8CG80 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ShfQ8CG80 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ShfQ8CG80 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
ShfQ8CG80 Gm45428-201ENSMUST00000209619 1789 ntBASIC10.95□□□□□ -0.66
ShfQ8CG80 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
ShfQ8CG80 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ShfQ8CG80 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
ShfQ8CG80 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ShfQ8CG80 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC10.95□□□□□ -0.66
ShfQ8CG80 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ShfQ8CG80 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
ShfQ8CG80 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
ShfQ8CG80 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
ShfQ8CG80 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
ShfQ8CG80 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
ShfQ8CG80 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
ShfQ8CG80 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
ShfQ8CG80 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
ShfQ8CG80 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC10.95□□□□□ -0.66
ShfQ8CG80 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ShfQ8CG80 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ShfQ8CG80 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC10.95□□□□□ -0.66
ShfQ8CG80 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
ShfQ8CG80 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ShfQ8CG80 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC10.95□□□□□ -0.66
ShfQ8CG80 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
ShfQ8CG80 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ShfQ8CG80 H2-Pa-201ENSMUST00000182803 626 ntBASIC10.95□□□□□ -0.66
ShfQ8CG80 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
ShfQ8CG80 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC10.95□□□□□ -0.66
ShfQ8CG80 Gm43818-201ENSMUST00000200605 466 ntBASIC10.95□□□□□ -0.66
ShfQ8CG80 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC10.95□□□□□ -0.66
ShfQ8CG80 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ShfQ8CG80 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ShfQ8CG80 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ShfQ8CG80 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
ShfQ8CG80 Gm37105-201ENSMUST00000192251 2085 ntBASIC10.95□□□□□ -0.66
ShfQ8CG80 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
ShfQ8CG80 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ShfQ8CG80 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
ShfQ8CG80 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
ShfQ8CG80 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ShfQ8CG80 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
ShfQ8CG80 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
ShfQ8CG80 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
ShfQ8CG80 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ShfQ8CG80 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
ShfQ8CG80 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ShfQ8CG80 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ShfQ8CG80 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
ShfQ8CG80 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC10.95□□□□□ -0.66
ShfQ8CG80 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
ShfQ8CG80 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ShfQ8CG80 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ShfQ8CG80 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
ShfQ8CG80 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
ShfQ8CG80 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ShfQ8CG80 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
ShfQ8CG80 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
ShfQ8CG80 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ShfQ8CG80 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
ShfQ8CG80 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
ShfQ8CG80 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC10.94□□□□□ -0.66
ShfQ8CG80 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ShfQ8CG80 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ShfQ8CG80 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
ShfQ8CG80 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
ShfQ8CG80 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
ShfQ8CG80 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ShfQ8CG80 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
ShfQ8CG80 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
ShfQ8CG80 Gm43579-201ENSMUST00000202387 1307 ntBASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms