Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
Brf1Q8CFK2 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC14.83□□□□□ -0.03
Brf1Q8CFK2 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Brf1Q8CFK2 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Brf1Q8CFK2 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Brf1Q8CFK2 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Brf1Q8CFK2 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Brf1Q8CFK2 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Brf1Q8CFK2 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Brf1Q8CFK2 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Brf1Q8CFK2 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Brf1Q8CFK2 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Brf1Q8CFK2 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC14.83□□□□□ -0.04
Brf1Q8CFK2 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC14.83□□□□□ -0.04
Brf1Q8CFK2 Gm3096-201ENSMUST00000185770 364 ntBASIC14.83□□□□□ -0.04
Brf1Q8CFK2 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Brf1Q8CFK2 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC14.83□□□□□ -0.04
Brf1Q8CFK2 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC14.83□□□□□ -0.04
Brf1Q8CFK2 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Brf1Q8CFK2 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Brf1Q8CFK2 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Brf1Q8CFK2 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC14.83□□□□□ -0.04
Brf1Q8CFK2 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Brf1Q8CFK2 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Brf1Q8CFK2 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Brf1Q8CFK2 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Brf1Q8CFK2 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Brf1Q8CFK2 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC14.83□□□□□ -0.04
Brf1Q8CFK2 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Brf1Q8CFK2 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Brf1Q8CFK2 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Brf1Q8CFK2 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Brf1Q8CFK2 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Brf1Q8CFK2 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Brf1Q8CFK2 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Brf1Q8CFK2 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Brf1Q8CFK2 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Brf1Q8CFK2 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC14.82□□□□□ -0.04
Brf1Q8CFK2 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Brf1Q8CFK2 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Brf1Q8CFK2 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC14.82□□□□□ -0.04
Brf1Q8CFK2 Gm27390-201ENSMUST00000184516 176 ntBASIC14.82□□□□□ -0.04
Brf1Q8CFK2 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Brf1Q8CFK2 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Brf1Q8CFK2 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC14.82□□□□□ -0.04
Brf1Q8CFK2 Gm7783-201ENSMUST00000204795 781 ntBASIC14.82□□□□□ -0.04
Brf1Q8CFK2 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC14.82□□□□□ -0.04
Brf1Q8CFK2 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC14.82□□□□□ -0.04
Brf1Q8CFK2 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Brf1Q8CFK2 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC14.82□□□□□ -0.04
Brf1Q8CFK2 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC14.82□□□□□ -0.04
Brf1Q8CFK2 Gm10312-201ENSMUST00000078515 489 ntBASIC14.82□□□□□ -0.04
Brf1Q8CFK2 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Brf1Q8CFK2 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Brf1Q8CFK2 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Brf1Q8CFK2 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Brf1Q8CFK2 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC14.82□□□□□ -0.04
Brf1Q8CFK2 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Brf1Q8CFK2 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Brf1Q8CFK2 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Brf1Q8CFK2 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Brf1Q8CFK2 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Brf1Q8CFK2 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Brf1Q8CFK2 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Brf1Q8CFK2 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Brf1Q8CFK2 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Brf1Q8CFK2 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Brf1Q8CFK2 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Brf1Q8CFK2 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Brf1Q8CFK2 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Brf1Q8CFK2 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Brf1Q8CFK2 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Brf1Q8CFK2 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Brf1Q8CFK2 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Brf1Q8CFK2 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Brf1Q8CFK2 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Brf1Q8CFK2 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Brf1Q8CFK2 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Brf1Q8CFK2 Gm11930-201ENSMUST00000117788 190 ntBASIC14.81□□□□□ -0.04
Brf1Q8CFK2 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Brf1Q8CFK2 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Brf1Q8CFK2 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Brf1Q8CFK2 Gm7584-201ENSMUST00000175829 940 ntBASIC14.81□□□□□ -0.04
Brf1Q8CFK2 Ighv1-60-201ENSMUST00000195816 405 ntBASIC14.81□□□□□ -0.04
Brf1Q8CFK2 Gm19994-201ENSMUST00000217086 586 ntBASIC14.81□□□□□ -0.04
Brf1Q8CFK2 AC163667.3-201ENSMUST00000225774 222 ntBASIC14.81□□□□□ -0.04
Brf1Q8CFK2 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Brf1Q8CFK2 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Brf1Q8CFK2 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Brf1Q8CFK2 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Brf1Q8CFK2 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Brf1Q8CFK2 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Brf1Q8CFK2 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Brf1Q8CFK2 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC14.81□□□□□ -0.04
Brf1Q8CFK2 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Brf1Q8CFK2 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Brf1Q8CFK2 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
Brf1Q8CFK2 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Brf1Q8CFK2 Cog3-203ENSMUST00000227473 4197 ntBASIC14.81□□□□□ -0.04
Brf1Q8CFK2 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms