Protein–RNA interactions for Protein: Q8CE13

Ccdc17, Coiled-coil domain-containing protein 17, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc17Q8CE13 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc17Q8CE13 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.84□□□□□ -0.35
Ccdc17Q8CE13 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc17Q8CE13 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc17Q8CE13 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc17Q8CE13 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Ccdc17Q8CE13 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc17Q8CE13 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc17Q8CE13 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Ccdc17Q8CE13 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.84□□□□□ -0.35
Ccdc17Q8CE13 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc17Q8CE13 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC12.84□□□□□ -0.35
Ccdc17Q8CE13 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc17Q8CE13 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc17Q8CE13 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12.84□□□□□ -0.35
Ccdc17Q8CE13 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.84□□□□□ -0.35
Ccdc17Q8CE13 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Ccdc17Q8CE13 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc17Q8CE13 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.84□□□□□ -0.35
Ccdc17Q8CE13 Gm28882-201ENSMUST00000185504 314 ntBASIC12.84□□□□□ -0.35
Ccdc17Q8CE13 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC12.84□□□□□ -0.35
Ccdc17Q8CE13 Gm45770-201ENSMUST00000212105 616 ntBASIC12.84□□□□□ -0.35
Ccdc17Q8CE13 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.84□□□□□ -0.35
Ccdc17Q8CE13 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.84□□□□□ -0.35
Ccdc17Q8CE13 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.84□□□□□ -0.35
Ccdc17Q8CE13 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Ccdc17Q8CE13 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc17Q8CE13 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Ccdc17Q8CE13 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc17Q8CE13 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Ccdc17Q8CE13 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc17Q8CE13 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc17Q8CE13 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc17Q8CE13 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.84□□□□□ -0.35
Ccdc17Q8CE13 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc17Q8CE13 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc17Q8CE13 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Ccdc17Q8CE13 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ccdc17Q8CE13 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ccdc17Q8CE13 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc17Q8CE13 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc17Q8CE13 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc17Q8CE13 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc17Q8CE13 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Ccdc17Q8CE13 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Ccdc17Q8CE13 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC12.83□□□□□ -0.36
Ccdc17Q8CE13 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Ccdc17Q8CE13 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc17Q8CE13 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.83□□□□□ -0.36
Ccdc17Q8CE13 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Ccdc17Q8CE13 Gm12291-201ENSMUST00000121627 311 ntBASIC12.83□□□□□ -0.36
Ccdc17Q8CE13 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.83□□□□□ -0.36
Ccdc17Q8CE13 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC12.83□□□□□ -0.36
Ccdc17Q8CE13 Gm37835-201ENSMUST00000193305 361 ntBASIC12.83□□□□□ -0.36
Ccdc17Q8CE13 Gm44126-201ENSMUST00000204831 514 ntBASIC12.83□□□□□ -0.36
Ccdc17Q8CE13 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC12.83□□□□□ -0.36
Ccdc17Q8CE13 D9Wsu149-201ENSMUST00000214169 594 ntBASIC12.83□□□□□ -0.36
Ccdc17Q8CE13 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.83□□□□□ -0.36
Ccdc17Q8CE13 AC154276.3-201ENSMUST00000227643 998 ntBASIC12.83□□□□□ -0.36
Ccdc17Q8CE13 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC12.83□□□□□ -0.36
Ccdc17Q8CE13 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Ccdc17Q8CE13 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.83□□□□□ -0.36
Ccdc17Q8CE13 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Ccdc17Q8CE13 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.83□□□□□ -0.36
Ccdc17Q8CE13 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Ccdc17Q8CE13 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc17Q8CE13 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc17Q8CE13 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc17Q8CE13 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc17Q8CE13 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc17Q8CE13 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Ccdc17Q8CE13 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc17Q8CE13 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.82□□□□□ -0.36
Ccdc17Q8CE13 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc17Q8CE13 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc17Q8CE13 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.82□□□□□ -0.36
Ccdc17Q8CE13 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Ccdc17Q8CE13 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.82□□□□□ -0.36
Ccdc17Q8CE13 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Ccdc17Q8CE13 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc17Q8CE13 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc17Q8CE13 Gm14665-201ENSMUST00000122294 557 ntBASIC12.82□□□□□ -0.36
Ccdc17Q8CE13 Gm19459-201ENSMUST00000176240 835 ntBASIC12.82□□□□□ -0.36
Ccdc17Q8CE13 Gm27438-201ENSMUST00000183480 110 ntBASIC12.82□□□□□ -0.36
Ccdc17Q8CE13 Gm27627-201ENSMUST00000183644 150 ntBASIC12.82□□□□□ -0.36
Ccdc17Q8CE13 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.82□□□□□ -0.36
Ccdc17Q8CE13 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC12.82□□□□□ -0.36
Ccdc17Q8CE13 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc17Q8CE13 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc17Q8CE13 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc17Q8CE13 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc17Q8CE13 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc17Q8CE13 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc17Q8CE13 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.82□□□□□ -0.36
Ccdc17Q8CE13 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc17Q8CE13 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc17Q8CE13 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc17Q8CE13 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms