Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
SynbQ8BI41 Gm14263-201ENSMUST00000117955 746 ntBASIC11.81□□□□□ -0.52
SynbQ8BI41 Gm12058-201ENSMUST00000118614 437 ntBASIC11.81□□□□□ -0.52
SynbQ8BI41 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.81□□□□□ -0.52
SynbQ8BI41 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SynbQ8BI41 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC11.81□□□□□ -0.52
SynbQ8BI41 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.81□□□□□ -0.52
SynbQ8BI41 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SynbQ8BI41 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.81□□□□□ -0.52
SynbQ8BI41 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
SynbQ8BI41 Mir6927-201ENSMUST00000184494 71 ntBASIC11.81□□□□□ -0.52
SynbQ8BI41 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.81□□□□□ -0.52
SynbQ8BI41 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.81□□□□□ -0.52
SynbQ8BI41 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.81□□□□□ -0.52
SynbQ8BI41 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.81□□□□□ -0.52
SynbQ8BI41 Gm42997-202ENSMUST00000200321 985 ntBASIC11.81□□□□□ -0.52
SynbQ8BI41 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC11.81□□□□□ -0.52
SynbQ8BI41 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC11.81□□□□□ -0.52
SynbQ8BI41 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.81□□□□□ -0.52
SynbQ8BI41 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SynbQ8BI41 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SynbQ8BI41 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.81□□□□□ -0.52
SynbQ8BI41 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SynbQ8BI41 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SynbQ8BI41 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SynbQ8BI41 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SynbQ8BI41 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.81□□□□□ -0.52
SynbQ8BI41 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
SynbQ8BI41 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.81□□□□□ -0.52
SynbQ8BI41 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SynbQ8BI41 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SynbQ8BI41 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
SynbQ8BI41 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SynbQ8BI41 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
SynbQ8BI41 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
SynbQ8BI41 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SynbQ8BI41 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SynbQ8BI41 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.8□□□□□ -0.52
SynbQ8BI41 Daam2-202ENSMUST00000224595 1926 ntBASIC11.8□□□□□ -0.52
SynbQ8BI41 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.8□□□□□ -0.52
SynbQ8BI41 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SynbQ8BI41 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.8□□□□□ -0.52
SynbQ8BI41 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SynbQ8BI41 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SynbQ8BI41 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SynbQ8BI41 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SynbQ8BI41 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.8□□□□□ -0.52
SynbQ8BI41 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.8□□□□□ -0.52
SynbQ8BI41 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SynbQ8BI41 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SynbQ8BI41 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
SynbQ8BI41 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
SynbQ8BI41 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC11.8□□□□□ -0.52
SynbQ8BI41 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.8□□□□□ -0.52
SynbQ8BI41 Gm13875-201ENSMUST00000120162 282 ntBASIC11.8□□□□□ -0.52
SynbQ8BI41 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SynbQ8BI41 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.8□□□□□ -0.52
SynbQ8BI41 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.8□□□□□ -0.52
SynbQ8BI41 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
SynbQ8BI41 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.8□□□□□ -0.52
SynbQ8BI41 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.8□□□□□ -0.52
SynbQ8BI41 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SynbQ8BI41 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC11.8□□□□□ -0.52
SynbQ8BI41 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.8□□□□□ -0.52
SynbQ8BI41 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SynbQ8BI41 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SynbQ8BI41 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SynbQ8BI41 Gm22058-201ENSMUST00000083393 310 ntBASIC11.8□□□□□ -0.52
SynbQ8BI41 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.8□□□□□ -0.52
SynbQ8BI41 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
SynbQ8BI41 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
SynbQ8BI41 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SynbQ8BI41 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SynbQ8BI41 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SynbQ8BI41 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
SynbQ8BI41 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SynbQ8BI41 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SynbQ8BI41 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
SynbQ8BI41 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SynbQ8BI41 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SynbQ8BI41 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SynbQ8BI41 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
SynbQ8BI41 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.8□□□□□ -0.52
SynbQ8BI41 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.8□□□□□ -0.52
SynbQ8BI41 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SynbQ8BI41 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SynbQ8BI41 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SynbQ8BI41 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SynbQ8BI41 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
SynbQ8BI41 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SynbQ8BI41 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SynbQ8BI41 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
SynbQ8BI41 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
SynbQ8BI41 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SynbQ8BI41 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SynbQ8BI41 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
SynbQ8BI41 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SynbQ8BI41 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SynbQ8BI41 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SynbQ8BI41 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms