Protein–RNA interactions for Protein: Q7TQK4

Exosc3, Exosome complex component RRP40, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Exosc3Q7TQK4 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Exosc3Q7TQK4 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Exosc3Q7TQK4 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.32□□□□□ -0.6
Exosc3Q7TQK4 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Exosc3Q7TQK4 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Exosc3Q7TQK4 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Exosc3Q7TQK4 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Exosc3Q7TQK4 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Exosc3Q7TQK4 Gm14109-201ENSMUST00000118814 309 ntBASIC11.32□□□□□ -0.6
Exosc3Q7TQK4 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Exosc3Q7TQK4 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Exosc3Q7TQK4 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Exosc3Q7TQK4 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Exosc3Q7TQK4 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.32□□□□□ -0.6
Exosc3Q7TQK4 Gm27046-201ENSMUST00000182160 463 ntBASIC11.32□□□□□ -0.6
Exosc3Q7TQK4 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.32□□□□□ -0.6
Exosc3Q7TQK4 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.32□□□□□ -0.6
Exosc3Q7TQK4 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Exosc3Q7TQK4 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC11.32□□□□□ -0.6
Exosc3Q7TQK4 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.32□□□□□ -0.6
Exosc3Q7TQK4 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Exosc3Q7TQK4 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.32□□□□□ -0.6
Exosc3Q7TQK4 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Exosc3Q7TQK4 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.32□□□□□ -0.6
Exosc3Q7TQK4 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Exosc3Q7TQK4 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Exosc3Q7TQK4 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Exosc3Q7TQK4 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Exosc3Q7TQK4 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Exosc3Q7TQK4 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Exosc3Q7TQK4 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.32□□□□□ -0.6
Exosc3Q7TQK4 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.32□□□□□ -0.6
Exosc3Q7TQK4 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Exosc3Q7TQK4 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Exosc3Q7TQK4 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Exosc3Q7TQK4 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Exosc3Q7TQK4 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Exosc3Q7TQK4 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Exosc3Q7TQK4 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Exosc3Q7TQK4 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Exosc3Q7TQK4 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Exosc3Q7TQK4 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Exosc3Q7TQK4 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Exosc3Q7TQK4 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Exosc3Q7TQK4 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Exosc3Q7TQK4 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Exosc3Q7TQK4 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Exosc3Q7TQK4 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.31□□□□□ -0.6
Exosc3Q7TQK4 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Exosc3Q7TQK4 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Exosc3Q7TQK4 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Exosc3Q7TQK4 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.31□□□□□ -0.6
Exosc3Q7TQK4 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Exosc3Q7TQK4 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Exosc3Q7TQK4 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Exosc3Q7TQK4 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.31□□□□□ -0.6
Exosc3Q7TQK4 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Exosc3Q7TQK4 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Exosc3Q7TQK4 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Exosc3Q7TQK4 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Exosc3Q7TQK4 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Exosc3Q7TQK4 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.31□□□□□ -0.6
Exosc3Q7TQK4 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Exosc3Q7TQK4 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Exosc3Q7TQK4 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Exosc3Q7TQK4 Gm8885-201ENSMUST00000189382 598 ntBASIC11.31□□□□□ -0.6
Exosc3Q7TQK4 Gm37259-201ENSMUST00000193903 849 ntBASIC11.31□□□□□ -0.6
Exosc3Q7TQK4 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.31□□□□□ -0.6
Exosc3Q7TQK4 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC11.31□□□□□ -0.6
Exosc3Q7TQK4 Gm19994-201ENSMUST00000217086 586 ntBASIC11.31□□□□□ -0.6
Exosc3Q7TQK4 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.31□□□□□ -0.6
Exosc3Q7TQK4 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Exosc3Q7TQK4 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Exosc3Q7TQK4 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Exosc3Q7TQK4 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Exosc3Q7TQK4 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Exosc3Q7TQK4 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Exosc3Q7TQK4 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Exosc3Q7TQK4 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Exosc3Q7TQK4 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Exosc3Q7TQK4 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Exosc3Q7TQK4 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Exosc3Q7TQK4 Pck2-205ENSMUST00000226352 2784 ntBASIC11.31□□□□□ -0.6
Exosc3Q7TQK4 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Exosc3Q7TQK4 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Exosc3Q7TQK4 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.31□□□□□ -0.6
Exosc3Q7TQK4 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Exosc3Q7TQK4 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Exosc3Q7TQK4 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Exosc3Q7TQK4 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.31□□□□□ -0.6
Exosc3Q7TQK4 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Exosc3Q7TQK4 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.3□□□□□ -0.6
Exosc3Q7TQK4 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Exosc3Q7TQK4 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Exosc3Q7TQK4 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Exosc3Q7TQK4 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Exosc3Q7TQK4 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Exosc3Q7TQK4 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Exosc3Q7TQK4 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Exosc3Q7TQK4 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms