Protein–RNA interactions for Protein: Q64287

Irf4, Interferon regulatory factor 4, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf4Q64287 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Irf4Q64287 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Irf4Q64287 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Irf4Q64287 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Irf4Q64287 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Irf4Q64287 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.08□□□□□ -0.48
Irf4Q64287 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Irf4Q64287 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Irf4Q64287 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Irf4Q64287 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Irf4Q64287 Gm12217-201ENSMUST00000118858 696 ntBASIC12.08□□□□□ -0.48
Irf4Q64287 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.08□□□□□ -0.48
Irf4Q64287 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Irf4Q64287 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Irf4Q64287 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Irf4Q64287 Mir6927-201ENSMUST00000184494 71 ntBASIC12.08□□□□□ -0.48
Irf4Q64287 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.08□□□□□ -0.48
Irf4Q64287 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Irf4Q64287 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Irf4Q64287 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Irf4Q64287 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Irf4Q64287 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Irf4Q64287 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Irf4Q64287 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Irf4Q64287 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Irf4Q64287 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Irf4Q64287 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Irf4Q64287 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Irf4Q64287 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Irf4Q64287 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Irf4Q64287 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Irf4Q64287 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Irf4Q64287 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Irf4Q64287 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Irf4Q64287 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Irf4Q64287 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Irf4Q64287 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Irf4Q64287 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Irf4Q64287 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Irf4Q64287 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Irf4Q64287 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Irf4Q64287 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Irf4Q64287 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Irf4Q64287 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.07□□□□□ -0.48
Irf4Q64287 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Irf4Q64287 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Irf4Q64287 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Irf4Q64287 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Irf4Q64287 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Irf4Q64287 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Irf4Q64287 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Irf4Q64287 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Irf4Q64287 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Irf4Q64287 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Irf4Q64287 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Irf4Q64287 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Irf4Q64287 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Irf4Q64287 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Irf4Q64287 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.07□□□□□ -0.48
Irf4Q64287 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Irf4Q64287 Gm7857-201ENSMUST00000117957 358 ntBASIC12.07□□□□□ -0.48
Irf4Q64287 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.07□□□□□ -0.48
Irf4Q64287 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Irf4Q64287 Gm37666-201ENSMUST00000194110 866 ntBASIC12.07□□□□□ -0.48
Irf4Q64287 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.07□□□□□ -0.48
Irf4Q64287 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Irf4Q64287 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Irf4Q64287 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Irf4Q64287 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.07□□□□□ -0.48
Irf4Q64287 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Irf4Q64287 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Irf4Q64287 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Irf4Q64287 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Irf4Q64287 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Irf4Q64287 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Irf4Q64287 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.07□□□□□ -0.48
Irf4Q64287 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Irf4Q64287 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Irf4Q64287 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Irf4Q64287 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Irf4Q64287 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Irf4Q64287 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Irf4Q64287 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Irf4Q64287 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Irf4Q64287 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Irf4Q64287 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Irf4Q64287 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Irf4Q64287 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Irf4Q64287 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Irf4Q64287 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Irf4Q64287 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Irf4Q64287 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.06□□□□□ -0.48
Irf4Q64287 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.06□□□□□ -0.48
Irf4Q64287 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Irf4Q64287 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.06□□□□□ -0.48
Irf4Q64287 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.06□□□□□ -0.48
Irf4Q64287 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Irf4Q64287 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Irf4Q64287 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Irf4Q64287 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms