Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC11.24□□□□□ -0.61
VcanQ62059 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VcanQ62059 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
VcanQ62059 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
VcanQ62059 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
VcanQ62059 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
VcanQ62059 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC11.24□□□□□ -0.61
VcanQ62059 Gm14892-201ENSMUST00000117636 267 ntBASIC11.24□□□□□ -0.61
VcanQ62059 Gm12418-201ENSMUST00000118116 942 ntBASIC11.24□□□□□ -0.61
VcanQ62059 Gm30055-201ENSMUST00000203175 803 ntBASIC11.24□□□□□ -0.61
VcanQ62059 Gm7082-201ENSMUST00000209880 969 ntBASIC11.24□□□□□ -0.61
VcanQ62059 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.24□□□□□ -0.61
VcanQ62059 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.24□□□□□ -0.61
VcanQ62059 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VcanQ62059 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VcanQ62059 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
VcanQ62059 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VcanQ62059 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VcanQ62059 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VcanQ62059 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.23□□□□□ -0.61
VcanQ62059 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VcanQ62059 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VcanQ62059 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
VcanQ62059 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC11.23□□□□□ -0.61
VcanQ62059 Gm23119-201ENSMUST00000158610 140 ntBASIC11.23□□□□□ -0.61
VcanQ62059 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
VcanQ62059 Gm17936-201ENSMUST00000199413 988 ntBASIC11.23□□□□□ -0.61
VcanQ62059 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
VcanQ62059 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC11.23□□□□□ -0.61
VcanQ62059 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
VcanQ62059 AC164099.1-201ENSMUST00000227780 333 ntBASIC11.23□□□□□ -0.61
VcanQ62059 Gm8181-201ENSMUST00000062242 669 ntBASIC11.23□□□□□ -0.61
VcanQ62059 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
VcanQ62059 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
VcanQ62059 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
VcanQ62059 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VcanQ62059 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
VcanQ62059 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
VcanQ62059 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
VcanQ62059 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
VcanQ62059 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VcanQ62059 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
VcanQ62059 Gm15196-201ENSMUST00000121406 482 ntBASIC11.23□□□□□ -0.61
VcanQ62059 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
VcanQ62059 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
VcanQ62059 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC11.23□□□□□ -0.61
VcanQ62059 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC11.23□□□□□ -0.61
VcanQ62059 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.23□□□□□ -0.61
VcanQ62059 AC162932.1-201ENSMUST00000219209 872 ntBASIC11.23□□□□□ -0.61
VcanQ62059 Gm26670-202ENSMUST00000226862 340 ntBASIC11.23□□□□□ -0.61
VcanQ62059 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VcanQ62059 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.23□□□□□ -0.61
VcanQ62059 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
VcanQ62059 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VcanQ62059 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
VcanQ62059 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
VcanQ62059 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
VcanQ62059 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
VcanQ62059 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
VcanQ62059 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
VcanQ62059 Gm13094-201ENSMUST00000117930 409 ntBASIC11.22□□□□□ -0.61
VcanQ62059 Gm12946-201ENSMUST00000122969 519 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
VcanQ62059 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
VcanQ62059 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC11.22□□□□□ -0.61
VcanQ62059 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
VcanQ62059 Gm9081-201ENSMUST00000182346 991 ntBASIC11.22□□□□□ -0.61
VcanQ62059 Gm9022-201ENSMUST00000182482 992 ntBASIC11.22□□□□□ -0.61
VcanQ62059 Ighv1-70-201ENSMUST00000196509 351 ntBASIC11.22□□□□□ -0.61
VcanQ62059 Gm18256-201ENSMUST00000209087 907 ntBASIC11.22□□□□□ -0.61
VcanQ62059 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
VcanQ62059 Gm5507-201ENSMUST00000091897 1008 ntBASIC11.22□□□□□ -0.61
VcanQ62059 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
VcanQ62059 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
VcanQ62059 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.22□□□□□ -0.61
VcanQ62059 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
VcanQ62059 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
VcanQ62059 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
VcanQ62059 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
VcanQ62059 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
VcanQ62059 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
VcanQ62059 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
VcanQ62059 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.22□□□□□ -0.61
VcanQ62059 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
VcanQ62059 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
VcanQ62059 Gm22661-201ENSMUST00000104192 132 ntBASIC11.22□□□□□ -0.61
VcanQ62059 Gm12129-201ENSMUST00000120104 1147 ntBASIC11.22□□□□□ -0.61
VcanQ62059 Gsdmcl2-202ENSMUST00000185391 796 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
VcanQ62059 Gm29543-201ENSMUST00000188138 967 ntBASIC11.22□□□□□ -0.61
VcanQ62059 Gm10263-201ENSMUST00000085163 300 ntBASIC11.22□□□□□ -0.61
VcanQ62059 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
VcanQ62059 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11.22□□□□□ -0.61
VcanQ62059 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
VcanQ62059 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
VcanQ62059 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
VcanQ62059 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
VcanQ62059 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
VcanQ62059 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
VcanQ62059 Gm19015-201ENSMUST00000184002 1189 ntBASIC11.22□□□□□ -0.61
VcanQ62059 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
VcanQ62059 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms