Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav5d-4Q5R1F6 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav5d-4Q5R1F6 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Trav5d-4Q5R1F6 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav5d-4Q5R1F6 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav5d-4Q5R1F6 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav5d-4Q5R1F6 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC10.58□□□□□ -0.72
Trav5d-4Q5R1F6 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Trav5d-4Q5R1F6 AC154517.2-201ENSMUST00000220829 2458 ntBASIC10.58□□□□□ -0.72
Trav5d-4Q5R1F6 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav5d-4Q5R1F6 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav5d-4Q5R1F6 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC10.58□□□□□ -0.72
Trav5d-4Q5R1F6 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav5d-4Q5R1F6 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav5d-4Q5R1F6 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav5d-4Q5R1F6 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav5d-4Q5R1F6 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav5d-4Q5R1F6 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav5d-4Q5R1F6 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Trav5d-4Q5R1F6 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Trav5d-4Q5R1F6 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Trav5d-4Q5R1F6 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
Trav5d-4Q5R1F6 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav5d-4Q5R1F6 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Trav5d-4Q5R1F6 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav5d-4Q5R1F6 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.57□□□□□ -0.72
Trav5d-4Q5R1F6 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav5d-4Q5R1F6 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav5d-4Q5R1F6 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav5d-4Q5R1F6 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Trav5d-4Q5R1F6 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav5d-4Q5R1F6 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav5d-4Q5R1F6 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav5d-4Q5R1F6 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC10.57□□□□□ -0.72
Trav5d-4Q5R1F6 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Trav5d-4Q5R1F6 Gm9083-201ENSMUST00000120423 819 ntBASIC10.57□□□□□ -0.72
Trav5d-4Q5R1F6 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC10.57□□□□□ -0.72
Trav5d-4Q5R1F6 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav5d-4Q5R1F6 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav5d-4Q5R1F6 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Trav5d-4Q5R1F6 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC10.57□□□□□ -0.72
Trav5d-4Q5R1F6 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav5d-4Q5R1F6 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav5d-4Q5R1F6 Gm10076-201ENSMUST00000073238 384 ntBASIC10.57□□□□□ -0.72
Trav5d-4Q5R1F6 Gm14132-201ENSMUST00000117188 1719 ntBASIC10.57□□□□□ -0.72
Trav5d-4Q5R1F6 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC10.57□□□□□ -0.72
Trav5d-4Q5R1F6 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav5d-4Q5R1F6 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav5d-4Q5R1F6 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav5d-4Q5R1F6 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav5d-4Q5R1F6 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Trav5d-4Q5R1F6 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav5d-4Q5R1F6 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav5d-4Q5R1F6 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav5d-4Q5R1F6 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5d-4Q5R1F6 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5d-4Q5R1F6 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5d-4Q5R1F6 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5d-4Q5R1F6 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC10.56□□□□□ -0.72
Trav5d-4Q5R1F6 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5d-4Q5R1F6 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5d-4Q5R1F6 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5d-4Q5R1F6 Map1b-203ENSMUST00000223725 2669 ntBASIC10.56□□□□□ -0.72
Trav5d-4Q5R1F6 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5d-4Q5R1F6 Gm7049-201ENSMUST00000223520 1712 ntBASIC10.56□□□□□ -0.72
Trav5d-4Q5R1F6 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5d-4Q5R1F6 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5d-4Q5R1F6 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Trav5d-4Q5R1F6 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5d-4Q5R1F6 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5d-4Q5R1F6 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5d-4Q5R1F6 Gm23931-201ENSMUST00000103842 109 ntBASIC10.56□□□□□ -0.72
Trav5d-4Q5R1F6 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC10.56□□□□□ -0.72
Trav5d-4Q5R1F6 Gm12314-201ENSMUST00000118104 538 ntBASIC10.56□□□□□ -0.72
Trav5d-4Q5R1F6 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC10.56□□□□□ -0.72
Trav5d-4Q5R1F6 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5d-4Q5R1F6 Gm13316-201ENSMUST00000140537 691 ntBASIC10.56□□□□□ -0.72
Trav5d-4Q5R1F6 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5d-4Q5R1F6 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5d-4Q5R1F6 Snora78-201ENSMUST00000158630 128 ntBASIC10.56□□□□□ -0.72
Trav5d-4Q5R1F6 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5d-4Q5R1F6 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC10.56□□□□□ -0.72
Trav5d-4Q5R1F6 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5d-4Q5R1F6 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC10.56□□□□□ -0.72
Trav5d-4Q5R1F6 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC10.56□□□□□ -0.72
Trav5d-4Q5R1F6 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC10.56□□□□□ -0.72
Trav5d-4Q5R1F6 Gm39404-201ENSMUST00000216350 313 ntBASIC10.56□□□□□ -0.72
Trav5d-4Q5R1F6 Gm17823-201ENSMUST00000217830 1006 ntBASIC10.56□□□□□ -0.72
Trav5d-4Q5R1F6 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5d-4Q5R1F6 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5d-4Q5R1F6 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Trav5d-4Q5R1F6 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC10.56□□□□□ -0.72
Trav5d-4Q5R1F6 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5d-4Q5R1F6 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5d-4Q5R1F6 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5d-4Q5R1F6 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC10.56□□□□□ -0.72
Trav5d-4Q5R1F6 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5d-4Q5R1F6 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5d-4Q5R1F6 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5d-4Q5R1F6 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms