Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Lmo4P61969 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lmo4P61969 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lmo4P61969 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lmo4P61969 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC9.92□□□□□ -0.82
Lmo4P61969 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lmo4P61969 AC160405.1-201ENSMUST00000218207 1545 ntBASIC9.92□□□□□ -0.82
Lmo4P61969 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC9.92□□□□□ -0.82
Lmo4P61969 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lmo4P61969 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC9.92□□□□□ -0.82
Lmo4P61969 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lmo4P61969 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lmo4P61969 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Lmo4P61969 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Lmo4P61969 Gm43081-201ENSMUST00000199082 1380 ntBASIC9.92□□□□□ -0.82
Lmo4P61969 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC9.92□□□□□ -0.82
Lmo4P61969 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Lmo4P61969 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lmo4P61969 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Lmo4P61969 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lmo4P61969 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lmo4P61969 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lmo4P61969 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC9.92□□□□□ -0.82
Lmo4P61969 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lmo4P61969 Ssr1-203ENSMUST00000225246 1825 ntBASIC9.92□□□□□ -0.82
Lmo4P61969 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Lmo4P61969 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC9.92□□□□□ -0.82
Lmo4P61969 Gm24891-201ENSMUST00000104391 136 ntBASIC9.92□□□□□ -0.82
Lmo4P61969 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lmo4P61969 Gm8566-201ENSMUST00000120174 465 ntBASIC9.92□□□□□ -0.82
Lmo4P61969 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC9.92□□□□□ -0.82
Lmo4P61969 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Lmo4P61969 Gm27530-201ENSMUST00000184096 98 ntBASIC9.92□□□□□ -0.82
Lmo4P61969 Gm2965-201ENSMUST00000198365 343 ntBASIC9.92□□□□□ -0.82
Lmo4P61969 Gm8956-201ENSMUST00000203939 825 ntBASIC9.92□□□□□ -0.82
Lmo4P61969 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC9.92□□□□□ -0.82
Lmo4P61969 Gm29787-201ENSMUST00000222129 849 ntBASIC9.92□□□□□ -0.82
Lmo4P61969 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lmo4P61969 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Lmo4P61969 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lmo4P61969 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lmo4P61969 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lmo4P61969 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lmo4P61969 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC9.92□□□□□ -0.82
Lmo4P61969 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lmo4P61969 Gm2420-201ENSMUST00000119864 2149 ntBASIC9.92□□□□□ -0.82
Lmo4P61969 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lmo4P61969 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Lmo4P61969 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lmo4P61969 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Lmo4P61969 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC9.92□□□□□ -0.82
Lmo4P61969 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lmo4P61969 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Lmo4P61969 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC9.92□□□□□ -0.82
Lmo4P61969 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Lmo4P61969 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lmo4P61969 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lmo4P61969 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lmo4P61969 Gm37513-201ENSMUST00000194830 2268 ntBASIC9.91□□□□□ -0.82
Lmo4P61969 Gm38378-201ENSMUST00000195153 2268 ntBASIC9.91□□□□□ -0.82
Lmo4P61969 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lmo4P61969 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lmo4P61969 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Lmo4P61969 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lmo4P61969 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lmo4P61969 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Lmo4P61969 Gm5419-201ENSMUST00000119301 527 ntBASIC9.91□□□□□ -0.82
Lmo4P61969 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lmo4P61969 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Lmo4P61969 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC9.91□□□□□ -0.82
Lmo4P61969 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC9.91□□□□□ -0.82
Lmo4P61969 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Lmo4P61969 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC9.91□□□□□ -0.82
Lmo4P61969 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC9.91□□□□□ -0.82
Lmo4P61969 Gm10109-202ENSMUST00000206890 1211 ntBASIC9.91□□□□□ -0.82
Lmo4P61969 AC098716.1-201ENSMUST00000213527 703 ntBASIC9.91□□□□□ -0.82
Lmo4P61969 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC9.91□□□□□ -0.82
Lmo4P61969 Gm18556-201ENSMUST00000219748 1031 ntBASIC9.91□□□□□ -0.82
Lmo4P61969 Gm5705-201ENSMUST00000066241 711 ntBASIC9.91□□□□□ -0.82
Lmo4P61969 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Lmo4P61969 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lmo4P61969 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Lmo4P61969 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Lmo4P61969 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lmo4P61969 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC9.91□□□□□ -0.82
Lmo4P61969 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lmo4P61969 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Lmo4P61969 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lmo4P61969 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lmo4P61969 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC9.91□□□□□ -0.82
Lmo4P61969 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC9.91□□□□□ -0.82
Lmo4P61969 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lmo4P61969 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Lmo4P61969 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lmo4P61969 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lmo4P61969 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lmo4P61969 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lmo4P61969 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lmo4P61969 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lmo4P61969 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 89.1 ms