Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.87□□□□□ -0.19
Rrp1P56183 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rrp1P56183 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.87□□□□□ -0.19
Rrp1P56183 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.87□□□□□ -0.19
Rrp1P56183 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rrp1P56183 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC13.87□□□□□ -0.19
Rrp1P56183 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Rrp1P56183 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13.87□□□□□ -0.19
Rrp1P56183 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.87□□□□□ -0.19
Rrp1P56183 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.87□□□□□ -0.19
Rrp1P56183 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.87□□□□□ -0.19
Rrp1P56183 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rrp1P56183 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rrp1P56183 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rrp1P56183 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Rrp1P56183 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Rrp1P56183 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC13.87□□□□□ -0.19
Rrp1P56183 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rrp1P56183 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rrp1P56183 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rrp1P56183 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rrp1P56183 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rrp1P56183 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rrp1P56183 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rrp1P56183 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rrp1P56183 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Rrp1P56183 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rrp1P56183 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rrp1P56183 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rrp1P56183 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rrp1P56183 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC13.87□□□□□ -0.19
Rrp1P56183 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rrp1P56183 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC13.87□□□□□ -0.19
Rrp1P56183 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rrp1P56183 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rrp1P56183 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
Rrp1P56183 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rrp1P56183 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rrp1P56183 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rrp1P56183 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rrp1P56183 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rrp1P56183 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC13.86□□□□□ -0.19
Rrp1P56183 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rrp1P56183 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rrp1P56183 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rrp1P56183 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rrp1P56183 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rrp1P56183 Gm13829-201ENSMUST00000119600 138 ntBASIC13.86□□□□□ -0.19
Rrp1P56183 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rrp1P56183 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rrp1P56183 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Rrp1P56183 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rrp1P56183 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.86□□□□□ -0.19
Rrp1P56183 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rrp1P56183 Gm22058-201ENSMUST00000083393 310 ntBASIC13.86□□□□□ -0.19
Rrp1P56183 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rrp1P56183 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
Rrp1P56183 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rrp1P56183 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Rrp1P56183 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rrp1P56183 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Rrp1P56183 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rrp1P56183 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.86□□□□□ -0.19
Rrp1P56183 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Rrp1P56183 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rrp1P56183 Ptprm-203ENSMUST00000224091 3773 ntBASIC13.85□□□□□ -0.19
Rrp1P56183 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rrp1P56183 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC13.85□□□□□ -0.19
Rrp1P56183 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rrp1P56183 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rrp1P56183 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rrp1P56183 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rrp1P56183 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
Rrp1P56183 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rrp1P56183 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Rrp1P56183 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rrp1P56183 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.85□□□□□ -0.19
Rrp1P56183 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.85□□□□□ -0.19
Rrp1P56183 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.85□□□□□ -0.19
Rrp1P56183 Gm5637-201ENSMUST00000153890 1119 ntBASIC13.85□□□□□ -0.19
Rrp1P56183 Gm6266-201ENSMUST00000203844 806 ntBASIC13.85□□□□□ -0.19
Rrp1P56183 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC13.85□□□□□ -0.19
Rrp1P56183 Gm45930-201ENSMUST00000221330 292 ntBASIC13.85□□□□□ -0.19
Rrp1P56183 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rrp1P56183 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rrp1P56183 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rrp1P56183 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rrp1P56183 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Rrp1P56183 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rrp1P56183 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rrp1P56183 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rrp1P56183 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rrp1P56183 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rrp1P56183 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Rrp1P56183 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rrp1P56183 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC13.85□□□□□ -0.19
Rrp1P56183 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Rrp1P56183 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Rrp1P56183 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rrp1P56183 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms