Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.5□□□□□ -0.41
Ddx6P54823 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Ddx6P54823 Gm45118-201ENSMUST00000208928 825 ntBASIC12.5□□□□□ -0.41
Ddx6P54823 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx6P54823 CT009713.8-201ENSMUST00000225448 560 ntBASIC12.5□□□□□ -0.41
Ddx6P54823 Gm1821-202ENSMUST00000227415 750 ntBASIC12.5□□□□□ -0.41
Ddx6P54823 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx6P54823 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx6P54823 Gm10702-201ENSMUST00000098929 1268 ntBASIC12.5□□□□□ -0.41
Ddx6P54823 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx6P54823 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Ddx6P54823 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx6P54823 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx6P54823 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx6P54823 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Ddx6P54823 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx6P54823 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.5□□□□□ -0.41
Ddx6P54823 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx6P54823 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx6P54823 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx6P54823 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx6P54823 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx6P54823 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx6P54823 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx6P54823 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx6P54823 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Ddx6P54823 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx6P54823 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx6P54823 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx6P54823 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.49□□□□□ -0.41
Ddx6P54823 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.49□□□□□ -0.41
Ddx6P54823 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx6P54823 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx6P54823 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Ddx6P54823 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Ddx6P54823 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx6P54823 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx6P54823 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.49□□□□□ -0.41
Ddx6P54823 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx6P54823 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx6P54823 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Ddx6P54823 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx6P54823 Gm14247-201ENSMUST00000120950 237 ntBASIC12.49□□□□□ -0.41
Ddx6P54823 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.49□□□□□ -0.41
Ddx6P54823 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.49□□□□□ -0.41
Ddx6P54823 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.49□□□□□ -0.41
Ddx6P54823 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Ddx6P54823 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx6P54823 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Ddx6P54823 Gm9555-201ENSMUST00000200908 583 ntBASIC12.49□□□□□ -0.41
Ddx6P54823 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Ddx6P54823 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC12.49□□□□□ -0.41
Ddx6P54823 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx6P54823 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.49□□□□□ -0.41
Ddx6P54823 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx6P54823 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx6P54823 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx6P54823 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx6P54823 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx6P54823 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx6P54823 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx6P54823 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx6P54823 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.49□□□□□ -0.41
Ddx6P54823 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx6P54823 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx6P54823 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx6P54823 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx6P54823 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.49□□□□□ -0.41
Ddx6P54823 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.49□□□□□ -0.41
Ddx6P54823 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx6P54823 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Ddx6P54823 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx6P54823 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx6P54823 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx6P54823 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Ddx6P54823 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx6P54823 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ddx6P54823 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx6P54823 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx6P54823 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.48□□□□□ -0.41
Ddx6P54823 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.48□□□□□ -0.41
Ddx6P54823 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.48□□□□□ -0.41
Ddx6P54823 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx6P54823 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.48□□□□□ -0.41
Ddx6P54823 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.48□□□□□ -0.41
Ddx6P54823 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.48□□□□□ -0.41
Ddx6P54823 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx6P54823 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx6P54823 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx6P54823 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.48□□□□□ -0.41
Ddx6P54823 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx6P54823 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ddx6P54823 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12.48□□□□□ -0.41
Ddx6P54823 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx6P54823 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Ddx6P54823 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC12.48□□□□□ -0.41
Ddx6P54823 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx6P54823 Gm5733-201ENSMUST00000190232 939 ntBASIC12.48□□□□□ -0.41
Ddx6P54823 Gm37835-201ENSMUST00000193305 361 ntBASIC12.48□□□□□ -0.41
Ddx6P54823 Gm29787-201ENSMUST00000222129 849 ntBASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms