Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cdkn1aP39689 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cdkn1aP39689 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
Cdkn1aP39689 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cdkn1aP39689 Gm4735-201ENSMUST00000138679 1302 ntBASIC10.16□□□□□ -0.78
Cdkn1aP39689 Gm5855-201ENSMUST00000200240 1305 ntBASIC10.16□□□□□ -0.78
Cdkn1aP39689 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cdkn1aP39689 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cdkn1aP39689 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
Cdkn1aP39689 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cdkn1aP39689 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cdkn1aP39689 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cdkn1aP39689 Mir7070-201ENSMUST00000183657 86 ntBASIC10.16□□□□□ -0.78
Cdkn1aP39689 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC10.16□□□□□ -0.78
Cdkn1aP39689 Gm28450-201ENSMUST00000187349 638 ntBASIC10.16□□□□□ -0.78
Cdkn1aP39689 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cdkn1aP39689 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC10.16□□□□□ -0.78
Cdkn1aP39689 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cdkn1aP39689 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC10.16□□□□□ -0.78
Cdkn1aP39689 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC10.16□□□□□ -0.78
Cdkn1aP39689 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC10.16□□□□□ -0.78
Cdkn1aP39689 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC10.16□□□□□ -0.78
Cdkn1aP39689 AC154252.2-201ENSMUST00000223593 767 ntBASIC10.16□□□□□ -0.78
Cdkn1aP39689 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cdkn1aP39689 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cdkn1aP39689 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cdkn1aP39689 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cdkn1aP39689 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cdkn1aP39689 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cdkn1aP39689 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cdkn1aP39689 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cdkn1aP39689 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC10.16□□□□□ -0.78
Cdkn1aP39689 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cdkn1aP39689 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cdkn1aP39689 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cdkn1aP39689 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cdkn1aP39689 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
Cdkn1aP39689 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
Cdkn1aP39689 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cdkn1aP39689 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
Cdkn1aP39689 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Cdkn1aP39689 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Cdkn1aP39689 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cdkn1aP39689 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Cdkn1aP39689 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cdkn1aP39689 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cdkn1aP39689 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Cdkn1aP39689 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cdkn1aP39689 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cdkn1aP39689 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cdkn1aP39689 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cdkn1aP39689 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cdkn1aP39689 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cdkn1aP39689 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cdkn1aP39689 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cdkn1aP39689 Gm12217-201ENSMUST00000118858 696 ntBASIC10.15□□□□□ -0.78
Cdkn1aP39689 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC10.15□□□□□ -0.78
Cdkn1aP39689 Mir5132-201ENSMUST00000175166 71 ntBASIC10.15□□□□□ -0.78
Cdkn1aP39689 Mir6927-201ENSMUST00000184494 71 ntBASIC10.15□□□□□ -0.78
Cdkn1aP39689 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Cdkn1aP39689 Gm7619-201ENSMUST00000210649 1282 ntBASIC10.15□□□□□ -0.78
Cdkn1aP39689 Gm19208-201ENSMUST00000213861 912 ntBASIC10.15□□□□□ -0.78
Cdkn1aP39689 Gm19994-201ENSMUST00000217086 586 ntBASIC10.15□□□□□ -0.78
Cdkn1aP39689 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC10.15□□□□□ -0.78
Cdkn1aP39689 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cdkn1aP39689 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cdkn1aP39689 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cdkn1aP39689 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cdkn1aP39689 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Cdkn1aP39689 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Cdkn1aP39689 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cdkn1aP39689 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cdkn1aP39689 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cdkn1aP39689 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cdkn1aP39689 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Cdkn1aP39689 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC10.15□□□□□ -0.78
Cdkn1aP39689 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC10.15□□□□□ -0.78
Cdkn1aP39689 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Cdkn1aP39689 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Cdkn1aP39689 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Cdkn1aP39689 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Cdkn1aP39689 CU062626.3-201ENSMUST00000225522 1411 ntBASIC10.15□□□□□ -0.79
Cdkn1aP39689 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Cdkn1aP39689 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC10.15□□□□□ -0.79
Cdkn1aP39689 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Cdkn1aP39689 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.79
Cdkn1aP39689 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC10.15□□□□□ -0.79
Cdkn1aP39689 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Cdkn1aP39689 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Cdkn1aP39689 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cdkn1aP39689 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cdkn1aP39689 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cdkn1aP39689 AC123834.1-201ENSMUST00000225346 2043 ntBASIC10.14□□□□□ -0.79
Cdkn1aP39689 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Cdkn1aP39689 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Cdkn1aP39689 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Cdkn1aP39689 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC10.14□□□□□ -0.79
Cdkn1aP39689 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cdkn1aP39689 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cdkn1aP39689 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC10.14□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms