Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.71□□□□□ -0.54
Slc6a11P31650 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Slc6a11P31650 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Slc6a11P31650 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Slc6a11P31650 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Slc6a11P31650 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Slc6a11P31650 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Slc6a11P31650 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Slc6a11P31650 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Slc6a11P31650 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Slc6a11P31650 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Slc6a11P31650 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Slc6a11P31650 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Slc6a11P31650 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Slc6a11P31650 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.7□□□□□ -0.54
Slc6a11P31650 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Slc6a11P31650 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Slc6a11P31650 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Slc6a11P31650 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Slc6a11P31650 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Slc6a11P31650 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Slc6a11P31650 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Slc6a11P31650 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Slc6a11P31650 Gm13369-201ENSMUST00000119442 987 ntBASIC11.7□□□□□ -0.54
Slc6a11P31650 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Slc6a11P31650 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Slc6a11P31650 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.7□□□□□ -0.54
Slc6a11P31650 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.7□□□□□ -0.54
Slc6a11P31650 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Slc6a11P31650 Gm17208-201ENSMUST00000168388 535 ntBASIC11.7□□□□□ -0.54
Slc6a11P31650 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.7□□□□□ -0.54
Slc6a11P31650 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.7□□□□□ -0.54
Slc6a11P31650 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.7□□□□□ -0.54
Slc6a11P31650 Gm37042-201ENSMUST00000193816 581 ntBASIC11.7□□□□□ -0.54
Slc6a11P31650 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.7□□□□□ -0.54
Slc6a11P31650 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.7□□□□□ -0.54
Slc6a11P31650 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.7□□□□□ -0.54
Slc6a11P31650 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC11.7□□□□□ -0.54
Slc6a11P31650 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Slc6a11P31650 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Slc6a11P31650 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Slc6a11P31650 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.7□□□□□ -0.54
Slc6a11P31650 Snora73a-201ENSMUST00000082453 205 ntBASIC11.7□□□□□ -0.54
Slc6a11P31650 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Slc6a11P31650 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Slc6a11P31650 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Slc6a11P31650 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Slc6a11P31650 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.7□□□□□ -0.54
Slc6a11P31650 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.7□□□□□ -0.54
Slc6a11P31650 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Slc6a11P31650 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Slc6a11P31650 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Slc6a11P31650 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Slc6a11P31650 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Slc6a11P31650 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Slc6a11P31650 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.7□□□□□ -0.54
Slc6a11P31650 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc6a11P31650 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Slc6a11P31650 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc6a11P31650 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc6a11P31650 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc6a11P31650 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.69□□□□□ -0.54
Slc6a11P31650 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.69□□□□□ -0.54
Slc6a11P31650 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc6a11P31650 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC11.69□□□□□ -0.54
Slc6a11P31650 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Slc6a11P31650 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Slc6a11P31650 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc6a11P31650 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc6a11P31650 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.69□□□□□ -0.54
Slc6a11P31650 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Slc6a11P31650 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC11.69□□□□□ -0.54
Slc6a11P31650 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc6a11P31650 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc6a11P31650 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.69□□□□□ -0.54
Slc6a11P31650 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.69□□□□□ -0.54
Slc6a11P31650 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.69□□□□□ -0.54
Slc6a11P31650 Gm10608-202ENSMUST00000213924 676 ntBASIC11.69□□□□□ -0.54
Slc6a11P31650 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Slc6a11P31650 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.69□□□□□ -0.54
Slc6a11P31650 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc6a11P31650 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc6a11P31650 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc6a11P31650 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Slc6a11P31650 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.69□□□□□ -0.54
Slc6a11P31650 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc6a11P31650 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Slc6a11P31650 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Slc6a11P31650 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc6a11P31650 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc6a11P31650 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc6a11P31650 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc6a11P31650 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc6a11P31650 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc6a11P31650 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Slc6a11P31650 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.69□□□□□ -0.54
Slc6a11P31650 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Slc6a11P31650 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.69□□□□□ -0.54
Slc6a11P31650 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
Slc6a11P31650 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms