Protein–RNA interactions for Protein: P29788

Vtn, Vitronectin, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VtnP29788 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.18□□□□□ -0.62
VtnP29788 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.18□□□□□ -0.62
VtnP29788 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VtnP29788 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.18□□□□□ -0.62
VtnP29788 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.18□□□□□ -0.62
VtnP29788 Mettl6-204ENSMUST00000227595 1027 ntBASIC11.18□□□□□ -0.62
VtnP29788 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VtnP29788 Gm24136-201ENSMUST00000083374 165 ntBASIC11.18□□□□□ -0.62
VtnP29788 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
VtnP29788 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
VtnP29788 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
VtnP29788 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
VtnP29788 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VtnP29788 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
VtnP29788 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
VtnP29788 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VtnP29788 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
VtnP29788 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VtnP29788 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
VtnP29788 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
VtnP29788 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VtnP29788 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.18□□□□□ -0.62
VtnP29788 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
VtnP29788 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.18□□□□□ -0.62
VtnP29788 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
VtnP29788 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.18□□□□□ -0.62
VtnP29788 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.18□□□□□ -0.62
VtnP29788 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
VtnP29788 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VtnP29788 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
VtnP29788 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
VtnP29788 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
VtnP29788 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
VtnP29788 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
VtnP29788 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.17□□□□□ -0.62
VtnP29788 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VtnP29788 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
VtnP29788 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
VtnP29788 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VtnP29788 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VtnP29788 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VtnP29788 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
VtnP29788 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
VtnP29788 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.17□□□□□ -0.62
VtnP29788 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VtnP29788 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VtnP29788 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VtnP29788 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
VtnP29788 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
VtnP29788 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.17□□□□□ -0.62
VtnP29788 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VtnP29788 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VtnP29788 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.17□□□□□ -0.62
VtnP29788 Gm9083-201ENSMUST00000120423 819 ntBASIC11.17□□□□□ -0.62
VtnP29788 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.17□□□□□ -0.62
VtnP29788 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
VtnP29788 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VtnP29788 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
VtnP29788 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
VtnP29788 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.17□□□□□ -0.62
VtnP29788 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
VtnP29788 Gm31256-201ENSMUST00000194705 506 ntBASIC11.17□□□□□ -0.62
VtnP29788 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.17□□□□□ -0.62
VtnP29788 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.17□□□□□ -0.62
VtnP29788 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VtnP29788 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VtnP29788 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VtnP29788 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VtnP29788 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
VtnP29788 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VtnP29788 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VtnP29788 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VtnP29788 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
VtnP29788 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VtnP29788 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
VtnP29788 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.17□□□□□ -0.62
VtnP29788 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VtnP29788 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
VtnP29788 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
VtnP29788 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
VtnP29788 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
VtnP29788 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
VtnP29788 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
VtnP29788 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VtnP29788 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VtnP29788 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
VtnP29788 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.17□□□□□ -0.62
VtnP29788 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
VtnP29788 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
VtnP29788 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
VtnP29788 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
VtnP29788 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
VtnP29788 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
VtnP29788 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
VtnP29788 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
VtnP29788 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
VtnP29788 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
VtnP29788 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
VtnP29788 Gm24830-201ENSMUST00000102024 166 ntBASIC11.16□□□□□ -0.62
VtnP29788 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms