Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxb3P09026 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.4□□□□□ -0.42
Hoxb3P09026 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxb3P09026 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxb3P09026 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxb3P09026 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Hoxb3P09026 Gm13315-201ENSMUST00000120376 991 ntBASIC12.4□□□□□ -0.42
Hoxb3P09026 Gm12899-201ENSMUST00000120565 551 ntBASIC12.4□□□□□ -0.42
Hoxb3P09026 Gm14999-201ENSMUST00000121039 624 ntBASIC12.4□□□□□ -0.42
Hoxb3P09026 Pradc1-204ENSMUST00000126805 953 ntTSL 2 BASIC12.4□□□□□ -0.42
Hoxb3P09026 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.4□□□□□ -0.42
Hoxb3P09026 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC12.4□□□□□ -0.42
Hoxb3P09026 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxb3P09026 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxb3P09026 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Hoxb3P09026 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxb3P09026 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.4□□□□□ -0.42
Hoxb3P09026 Gm6855-201ENSMUST00000206307 790 ntBASIC12.4□□□□□ -0.42
Hoxb3P09026 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.4□□□□□ -0.42
Hoxb3P09026 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.4□□□□□ -0.42
Hoxb3P09026 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxb3P09026 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Hoxb3P09026 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxb3P09026 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.4□□□□□ -0.42
Hoxb3P09026 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxb3P09026 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Hoxb3P09026 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxb3P09026 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxb3P09026 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxb3P09026 Pdlim5-204ENSMUST00000168967 1755 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxb3P09026 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxb3P09026 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Hoxb3P09026 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Hoxb3P09026 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxb3P09026 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxb3P09026 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.39□□□□□ -0.43
Hoxb3P09026 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxb3P09026 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxb3P09026 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.39□□□□□ -0.43
Hoxb3P09026 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.39□□□□□ -0.43
Hoxb3P09026 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxb3P09026 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Hoxb3P09026 E130114P18Rik-201ENSMUST00000107067 1092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxb3P09026 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxb3P09026 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Hoxb3P09026 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxb3P09026 Gm24845-201ENSMUST00000158034 109 ntBASIC12.39□□□□□ -0.43
Hoxb3P09026 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC12.39□□□□□ -0.43
Hoxb3P09026 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.39□□□□□ -0.43
Hoxb3P09026 Gm37638-201ENSMUST00000194337 1123 ntBASIC12.39□□□□□ -0.43
Hoxb3P09026 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC12.39□□□□□ -0.43
Hoxb3P09026 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxb3P09026 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.39□□□□□ -0.43
Hoxb3P09026 Gm39404-201ENSMUST00000216350 313 ntBASIC12.39□□□□□ -0.43
Hoxb3P09026 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.39□□□□□ -0.43
Hoxb3P09026 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.39□□□□□ -0.43
Hoxb3P09026 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Hoxb3P09026 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxb3P09026 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxb3P09026 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.39□□□□□ -0.43
Hoxb3P09026 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Hoxb3P09026 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxb3P09026 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxb3P09026 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxb3P09026 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC12.39□□□□□ -0.43
Hoxb3P09026 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxb3P09026 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxb3P09026 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxb3P09026 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxb3P09026 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.39□□□□□ -0.43
Hoxb3P09026 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxb3P09026 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxb3P09026 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxb3P09026 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxb3P09026 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Hoxb3P09026 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxb3P09026 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxb3P09026 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxb3P09026 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxb3P09026 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxb3P09026 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.38□□□□□ -0.43
Hoxb3P09026 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxb3P09026 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxb3P09026 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxb3P09026 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxb3P09026 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Hoxb3P09026 Gm13615-201ENSMUST00000120242 1612 ntBASIC12.38□□□□□ -0.43
Hoxb3P09026 Gm43052-201ENSMUST00000201451 1628 ntBASIC12.38□□□□□ -0.43
Hoxb3P09026 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Hoxb3P09026 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxb3P09026 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxb3P09026 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxb3P09026 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.38□□□□□ -0.43
Hoxb3P09026 Gm11893-201ENSMUST00000117829 491 ntBASIC12.38□□□□□ -0.43
Hoxb3P09026 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxb3P09026 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.38□□□□□ -0.43
Hoxb3P09026 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxb3P09026 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxb3P09026 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC12.38□□□□□ -0.43
Hoxb3P09026 Gm9625-201ENSMUST00000180422 955 ntBASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms