Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
TcraP01849 Gm12485-201ENSMUST00000119641 291 ntBASIC8.99□□□□□ -0.97
TcraP01849 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC8.99□□□□□ -0.97
TcraP01849 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
TcraP01849 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
TcraP01849 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
TcraP01849 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
TcraP01849 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
TcraP01849 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC8.99□□□□□ -0.97
TcraP01849 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC8.99□□□□□ -0.97
TcraP01849 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
TcraP01849 AC159114.1-201ENSMUST00000220349 266 ntBASIC8.99□□□□□ -0.97
TcraP01849 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC8.99□□□□□ -0.97
TcraP01849 Gm24447-201ENSMUST00000083977 338 ntBASIC8.99□□□□□ -0.97
TcraP01849 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
TcraP01849 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
TcraP01849 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
TcraP01849 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
TcraP01849 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
TcraP01849 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
TcraP01849 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
TcraP01849 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
TcraP01849 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
TcraP01849 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
TcraP01849 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
TcraP01849 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
TcraP01849 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
TcraP01849 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
TcraP01849 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
TcraP01849 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
TcraP01849 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
TcraP01849 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
TcraP01849 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
TcraP01849 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
TcraP01849 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
TcraP01849 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
TcraP01849 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
TcraP01849 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
TcraP01849 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
TcraP01849 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
TcraP01849 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
TcraP01849 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
TcraP01849 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
TcraP01849 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
TcraP01849 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
TcraP01849 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
TcraP01849 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
TcraP01849 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC8.98□□□□□ -0.97
TcraP01849 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
TcraP01849 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
TcraP01849 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
TcraP01849 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
TcraP01849 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
TcraP01849 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
TcraP01849 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC8.98□□□□□ -0.97
TcraP01849 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
TcraP01849 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC8.98□□□□□ -0.97
TcraP01849 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC8.98□□□□□ -0.97
TcraP01849 Gm14057-201ENSMUST00000120631 482 ntBASIC8.98□□□□□ -0.97
TcraP01849 Gm12151-201ENSMUST00000121374 290 ntBASIC8.98□□□□□ -0.97
TcraP01849 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC8.98□□□□□ -0.97
TcraP01849 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
TcraP01849 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
TcraP01849 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
TcraP01849 Gm27306-201ENSMUST00000183970 107 ntBASIC8.98□□□□□ -0.97
TcraP01849 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC8.98□□□□□ -0.97
TcraP01849 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC8.98□□□□□ -0.97
TcraP01849 Gm9797-201ENSMUST00000052902 613 ntBASIC8.98□□□□□ -0.97
TcraP01849 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC8.98□□□□□ -0.97
TcraP01849 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
TcraP01849 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
TcraP01849 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
TcraP01849 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
TcraP01849 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
TcraP01849 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
TcraP01849 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
TcraP01849 Gm2128-201ENSMUST00000108009 2560 ntBASIC8.98□□□□□ -0.97
TcraP01849 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
TcraP01849 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
TcraP01849 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
TcraP01849 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC8.98□□□□□ -0.97
TcraP01849 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
TcraP01849 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC8.97□□□□□ -0.97
TcraP01849 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
TcraP01849 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
TcraP01849 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
TcraP01849 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
TcraP01849 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
TcraP01849 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
TcraP01849 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC8.97□□□□□ -0.97
TcraP01849 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
TcraP01849 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
TcraP01849 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
TcraP01849 Gm43858-201ENSMUST00000199418 1778 ntBASIC8.97□□□□□ -0.97
TcraP01849 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
TcraP01849 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
TcraP01849 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
TcraP01849 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
TcraP01849 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
TcraP01849 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms