Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tcof1O08784 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tcof1O08784 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tcof1O08784 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tcof1O08784 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tcof1O08784 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tcof1O08784 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tcof1O08784 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tcof1O08784 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tcof1O08784 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tcof1O08784 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tcof1O08784 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tcof1O08784 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tcof1O08784 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Tcof1O08784 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tcof1O08784 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tcof1O08784 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
Tcof1O08784 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Tcof1O08784 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.4□□□□□ -0.1
Tcof1O08784 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC14.4□□□□□ -0.1
Tcof1O08784 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC14.4□□□□□ -0.1
Tcof1O08784 Gm12176-201ENSMUST00000121420 875 ntBASIC14.4□□□□□ -0.1
Tcof1O08784 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tcof1O08784 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC14.4□□□□□ -0.1
Tcof1O08784 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tcof1O08784 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Tcof1O08784 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Tcof1O08784 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Tcof1O08784 Gm8913-201ENSMUST00000209491 641 ntBASIC14.4□□□□□ -0.1
Tcof1O08784 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC14.4□□□□□ -0.1
Tcof1O08784 AC157950.1-201ENSMUST00000217561 2168 ntBASIC14.4□□□□□ -0.1
Tcof1O08784 AC153974.2-201ENSMUST00000218577 1025 ntBASIC14.4□□□□□ -0.1
Tcof1O08784 Dhrs4-202ENSMUST00000226168 828 ntBASIC14.4□□□□□ -0.1
Tcof1O08784 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tcof1O08784 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tcof1O08784 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tcof1O08784 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC14.39□□□□□ -0.11
Tcof1O08784 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tcof1O08784 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tcof1O08784 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tcof1O08784 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tcof1O08784 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tcof1O08784 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Tcof1O08784 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tcof1O08784 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC14.39□□□□□ -0.11
Tcof1O08784 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tcof1O08784 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tcof1O08784 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC14.39□□□□□ -0.11
Tcof1O08784 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Tcof1O08784 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tcof1O08784 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC14.39□□□□□ -0.11
Tcof1O08784 Gm9333-201ENSMUST00000205452 1323 ntBASIC14.39□□□□□ -0.11
Tcof1O08784 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC14.39□□□□□ -0.11
Tcof1O08784 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tcof1O08784 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tcof1O08784 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tcof1O08784 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tcof1O08784 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Tcof1O08784 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tcof1O08784 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tcof1O08784 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tcof1O08784 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC14.39□□□□□ -0.11
Tcof1O08784 Mir5120-201ENSMUST00000175020 78 ntBASIC14.39□□□□□ -0.11
Tcof1O08784 Mir6979-201ENSMUST00000183927 56 ntBASIC14.39□□□□□ -0.11
Tcof1O08784 Gstp-ps-201ENSMUST00000195526 631 ntBASIC14.39□□□□□ -0.11
Tcof1O08784 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC14.39□□□□□ -0.11
Tcof1O08784 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tcof1O08784 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tcof1O08784 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tcof1O08784 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tcof1O08784 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC14.38□□□□□ -0.11
Tcof1O08784 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Tcof1O08784 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tcof1O08784 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tcof1O08784 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tcof1O08784 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tcof1O08784 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Tcof1O08784 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tcof1O08784 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Tcof1O08784 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tcof1O08784 AC164702.1-201ENSMUST00000220135 2212 ntBASIC14.38□□□□□ -0.11
Tcof1O08784 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tcof1O08784 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Tcof1O08784 Gm13722-201ENSMUST00000117964 3066 ntBASIC14.38□□□□□ -0.11
Tcof1O08784 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tcof1O08784 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tcof1O08784 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Tcof1O08784 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Tcof1O08784 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tcof1O08784 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC14.38□□□□□ -0.11
Tcof1O08784 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tcof1O08784 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC14.38□□□□□ -0.11
Tcof1O08784 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tcof1O08784 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC14.38□□□□□ -0.11
Tcof1O08784 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Tcof1O08784 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Tcof1O08784 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC14.38□□□□□ -0.11
Tcof1O08784 Gm13296-201ENSMUST00000117854 997 ntBASIC14.38□□□□□ -0.11
Tcof1O08784 Gm13996-201ENSMUST00000118456 430 ntBASIC14.38□□□□□ -0.11
Tcof1O08784 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms