Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Tmem54Q9D7S1 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tmem54Q9D7S1 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tmem54Q9D7S1 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Tmem54Q9D7S1 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tmem54Q9D7S1 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tmem54Q9D7S1 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tmem54Q9D7S1 Gm6015-201ENSMUST00000217493 1586 ntBASIC10.81□□□□□ -0.68
Tmem54Q9D7S1 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tmem54Q9D7S1 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tmem54Q9D7S1 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tmem54Q9D7S1 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tmem54Q9D7S1 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Tmem54Q9D7S1 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tmem54Q9D7S1 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tmem54Q9D7S1 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tmem54Q9D7S1 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem54Q9D7S1 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Tmem54Q9D7S1 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Tmem54Q9D7S1 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem54Q9D7S1 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC10.8□□□□□ -0.68
Tmem54Q9D7S1 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
Tmem54Q9D7S1 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem54Q9D7S1 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Tmem54Q9D7S1 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem54Q9D7S1 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem54Q9D7S1 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem54Q9D7S1 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem54Q9D7S1 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem54Q9D7S1 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
Tmem54Q9D7S1 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem54Q9D7S1 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
Tmem54Q9D7S1 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem54Q9D7S1 Gm24830-201ENSMUST00000102024 166 ntBASIC10.8□□□□□ -0.68
Tmem54Q9D7S1 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem54Q9D7S1 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem54Q9D7S1 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem54Q9D7S1 Gm27046-201ENSMUST00000182160 463 ntBASIC10.8□□□□□ -0.68
Tmem54Q9D7S1 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem54Q9D7S1 Gm44414-201ENSMUST00000203660 2109 ntBASIC10.8□□□□□ -0.68
Tmem54Q9D7S1 Gm7619-201ENSMUST00000210649 1282 ntBASIC10.8□□□□□ -0.68
Tmem54Q9D7S1 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC10.8□□□□□ -0.68
Tmem54Q9D7S1 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC10.8□□□□□ -0.68
Tmem54Q9D7S1 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem54Q9D7S1 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem54Q9D7S1 Gm9996-201ENSMUST00000070359 913 ntBASIC10.8□□□□□ -0.68
Tmem54Q9D7S1 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Tmem54Q9D7S1 Gm26232-201ENSMUST00000083360 166 ntBASIC10.8□□□□□ -0.68
Tmem54Q9D7S1 Rnu1b6-201ENSMUST00000083839 166 ntBASIC10.8□□□□□ -0.68
Tmem54Q9D7S1 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Tmem54Q9D7S1 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Tmem54Q9D7S1 Gm18626-201ENSMUST00000221512 1409 ntBASIC10.8□□□□□ -0.68
Tmem54Q9D7S1 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Tmem54Q9D7S1 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem54Q9D7S1 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem54Q9D7S1 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem54Q9D7S1 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
Tmem54Q9D7S1 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
Tmem54Q9D7S1 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem54Q9D7S1 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem54Q9D7S1 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem54Q9D7S1 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem54Q9D7S1 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Tmem54Q9D7S1 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem54Q9D7S1 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem54Q9D7S1 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem54Q9D7S1 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem54Q9D7S1 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Tmem54Q9D7S1 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC10.8□□□□□ -0.68
Tmem54Q9D7S1 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tmem54Q9D7S1 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem54Q9D7S1 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem54Q9D7S1 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem54Q9D7S1 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem54Q9D7S1 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem54Q9D7S1 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem54Q9D7S1 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Tmem54Q9D7S1 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem54Q9D7S1 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem54Q9D7S1 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Tmem54Q9D7S1 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Tmem54Q9D7S1 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem54Q9D7S1 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem54Q9D7S1 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem54Q9D7S1 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem54Q9D7S1 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem54Q9D7S1 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem54Q9D7S1 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Tmem54Q9D7S1 Gm14109-201ENSMUST00000118814 309 ntBASIC10.79□□□□□ -0.68
Tmem54Q9D7S1 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC10.79□□□□□ -0.68
Tmem54Q9D7S1 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem54Q9D7S1 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem54Q9D7S1 Gm27320-201ENSMUST00000184892 109 ntBASIC10.79□□□□□ -0.68
Tmem54Q9D7S1 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC10.79□□□□□ -0.68
Tmem54Q9D7S1 Gm8885-201ENSMUST00000189382 598 ntBASIC10.79□□□□□ -0.68
Tmem54Q9D7S1 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem54Q9D7S1 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem54Q9D7S1 Gm18615-201ENSMUST00000222919 1031 ntBASIC10.79□□□□□ -0.68
Tmem54Q9D7S1 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tmem54Q9D7S1 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms