Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Cfap53Q9D439 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
Cfap53Q9D439 Gm12314-201ENSMUST00000118104 538 ntBASIC13.55□□□□□ -0.24
Cfap53Q9D439 Gm13342-201ENSMUST00000121055 207 ntBASIC13.55□□□□□ -0.24
Cfap53Q9D439 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.55□□□□□ -0.24
Cfap53Q9D439 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cfap53Q9D439 Gm17420-201ENSMUST00000164753 153 ntBASIC13.55□□□□□ -0.24
Cfap53Q9D439 Gm27572-201ENSMUST00000183702 255 ntBASIC13.55□□□□□ -0.24
Cfap53Q9D439 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC13.55□□□□□ -0.24
Cfap53Q9D439 Gm42627-201ENSMUST00000197347 224 ntBASIC13.55□□□□□ -0.24
Cfap53Q9D439 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.55□□□□□ -0.24
Cfap53Q9D439 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC13.55□□□□□ -0.24
Cfap53Q9D439 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC13.55□□□□□ -0.24
Cfap53Q9D439 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cfap53Q9D439 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.55□□□□□ -0.24
Cfap53Q9D439 Gm10076-201ENSMUST00000073238 384 ntBASIC13.55□□□□□ -0.24
Cfap53Q9D439 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cfap53Q9D439 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cfap53Q9D439 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Cfap53Q9D439 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Cfap53Q9D439 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cfap53Q9D439 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cfap53Q9D439 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC13.55□□□□□ -0.24
Cfap53Q9D439 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cfap53Q9D439 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cfap53Q9D439 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cfap53Q9D439 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cfap53Q9D439 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cfap53Q9D439 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cfap53Q9D439 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cfap53Q9D439 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cfap53Q9D439 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cfap53Q9D439 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cfap53Q9D439 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cfap53Q9D439 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cfap53Q9D439 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cfap53Q9D439 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Cfap53Q9D439 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cfap53Q9D439 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cfap53Q9D439 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cfap53Q9D439 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cfap53Q9D439 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Cfap53Q9D439 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC13.54□□□□□ -0.24
Cfap53Q9D439 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cfap53Q9D439 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cfap53Q9D439 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cfap53Q9D439 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13.54□□□□□ -0.24
Cfap53Q9D439 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cfap53Q9D439 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Cfap53Q9D439 AC125209.1-201ENSMUST00000225812 766 ntBASIC13.54□□□□□ -0.24
Cfap53Q9D439 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cfap53Q9D439 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cfap53Q9D439 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cfap53Q9D439 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cfap53Q9D439 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cfap53Q9D439 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cfap53Q9D439 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cfap53Q9D439 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cfap53Q9D439 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Cfap53Q9D439 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cfap53Q9D439 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Cfap53Q9D439 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Cfap53Q9D439 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cfap53Q9D439 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cfap53Q9D439 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cfap53Q9D439 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cfap53Q9D439 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cfap53Q9D439 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cfap53Q9D439 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cfap53Q9D439 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cfap53Q9D439 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cfap53Q9D439 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Cfap53Q9D439 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cfap53Q9D439 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cfap53Q9D439 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cfap53Q9D439 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cfap53Q9D439 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cfap53Q9D439 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cfap53Q9D439 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cfap53Q9D439 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cfap53Q9D439 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cfap53Q9D439 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC13.53□□□□□ -0.24
Cfap53Q9D439 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cfap53Q9D439 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cfap53Q9D439 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cfap53Q9D439 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Cfap53Q9D439 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cfap53Q9D439 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cfap53Q9D439 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC13.53□□□□□ -0.24
Cfap53Q9D439 Gm12058-201ENSMUST00000118614 437 ntBASIC13.53□□□□□ -0.24
Cfap53Q9D439 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.53□□□□□ -0.24
Cfap53Q9D439 Mospd4-201ENSMUST00000180618 576 ntBASIC13.53□□□□□ -0.24
Cfap53Q9D439 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Cfap53Q9D439 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC13.53□□□□□ -0.24
Cfap53Q9D439 Mir7085-201ENSMUST00000184353 66 ntBASIC13.53□□□□□ -0.24
Cfap53Q9D439 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cfap53Q9D439 Gm5850-201ENSMUST00000192923 1206 ntBASIC13.53□□□□□ -0.24
Cfap53Q9D439 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC13.53□□□□□ -0.24
Cfap53Q9D439 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.53□□□□□ -0.24
Cfap53Q9D439 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms