Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.58□□□□□ -0.4
Cldnd1Q9CQX5 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cldnd1Q9CQX5 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Cldnd1Q9CQX5 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Cldnd1Q9CQX5 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC12.58□□□□□ -0.4
Cldnd1Q9CQX5 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cldnd1Q9CQX5 Gm4654-201ENSMUST00000183305 982 ntBASIC12.58□□□□□ -0.4
Cldnd1Q9CQX5 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.58□□□□□ -0.4
Cldnd1Q9CQX5 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.58□□□□□ -0.4
Cldnd1Q9CQX5 CT485606.1-201ENSMUST00000213187 878 ntBASIC12.58□□□□□ -0.4
Cldnd1Q9CQX5 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.58□□□□□ -0.4
Cldnd1Q9CQX5 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.58□□□□□ -0.4
Cldnd1Q9CQX5 Gm19009-201ENSMUST00000223072 823 ntBASIC12.58□□□□□ -0.4
Cldnd1Q9CQX5 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Cldnd1Q9CQX5 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.58□□□□□ -0.4
Cldnd1Q9CQX5 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cldnd1Q9CQX5 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cldnd1Q9CQX5 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cldnd1Q9CQX5 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cldnd1Q9CQX5 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cldnd1Q9CQX5 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cldnd1Q9CQX5 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cldnd1Q9CQX5 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cldnd1Q9CQX5 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cldnd1Q9CQX5 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cldnd1Q9CQX5 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cldnd1Q9CQX5 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cldnd1Q9CQX5 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cldnd1Q9CQX5 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cldnd1Q9CQX5 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cldnd1Q9CQX5 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cldnd1Q9CQX5 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Cldnd1Q9CQX5 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cldnd1Q9CQX5 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cldnd1Q9CQX5 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Cldnd1Q9CQX5 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cldnd1Q9CQX5 Gm7278-201ENSMUST00000119836 1401 ntBASIC12.57□□□□□ -0.4
Cldnd1Q9CQX5 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.57□□□□□ -0.4
Cldnd1Q9CQX5 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cldnd1Q9CQX5 Gm22920-201ENSMUST00000102175 109 ntBASIC12.57□□□□□ -0.4
Cldnd1Q9CQX5 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cldnd1Q9CQX5 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.57□□□□□ -0.4
Cldnd1Q9CQX5 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC12.57□□□□□ -0.4
Cldnd1Q9CQX5 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cldnd1Q9CQX5 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC12.57□□□□□ -0.4
Cldnd1Q9CQX5 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cldnd1Q9CQX5 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Cldnd1Q9CQX5 Gm8815-201ENSMUST00000173809 620 ntBASIC12.57□□□□□ -0.4
Cldnd1Q9CQX5 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cldnd1Q9CQX5 Gm29499-201ENSMUST00000189151 486 ntBASIC12.57□□□□□ -0.4
Cldnd1Q9CQX5 Gm28329-201ENSMUST00000191208 689 ntBASIC12.57□□□□□ -0.4
Cldnd1Q9CQX5 Gm29171-201ENSMUST00000191397 486 ntBASIC12.57□□□□□ -0.4
Cldnd1Q9CQX5 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Cldnd1Q9CQX5 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC12.57□□□□□ -0.4
Cldnd1Q9CQX5 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC12.57□□□□□ -0.4
Cldnd1Q9CQX5 Gm9661-201ENSMUST00000221611 1122 ntBASIC12.57□□□□□ -0.4
Cldnd1Q9CQX5 CT025553.1-201ENSMUST00000226292 299 ntBASIC12.57□□□□□ -0.4
Cldnd1Q9CQX5 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cldnd1Q9CQX5 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cldnd1Q9CQX5 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.57□□□□□ -0.4
Cldnd1Q9CQX5 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Cldnd1Q9CQX5 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cldnd1Q9CQX5 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cldnd1Q9CQX5 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cldnd1Q9CQX5 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cldnd1Q9CQX5 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cldnd1Q9CQX5 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Cldnd1Q9CQX5 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cldnd1Q9CQX5 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cldnd1Q9CQX5 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldnd1Q9CQX5 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldnd1Q9CQX5 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.56□□□□□ -0.4
Cldnd1Q9CQX5 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldnd1Q9CQX5 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldnd1Q9CQX5 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Cldnd1Q9CQX5 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldnd1Q9CQX5 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldnd1Q9CQX5 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldnd1Q9CQX5 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldnd1Q9CQX5 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldnd1Q9CQX5 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Cldnd1Q9CQX5 Gm14193-201ENSMUST00000105067 153 ntBASIC12.56□□□□□ -0.4
Cldnd1Q9CQX5 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldnd1Q9CQX5 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cldnd1Q9CQX5 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC12.56□□□□□ -0.4
Cldnd1Q9CQX5 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC12.56□□□□□ -0.4
Cldnd1Q9CQX5 Gm14219-201ENSMUST00000120414 288 ntBASIC12.56□□□□□ -0.4
Cldnd1Q9CQX5 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldnd1Q9CQX5 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldnd1Q9CQX5 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldnd1Q9CQX5 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cldnd1Q9CQX5 Gm18711-201ENSMUST00000199341 750 ntBASIC12.56□□□□□ -0.4
Cldnd1Q9CQX5 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.56□□□□□ -0.4
Cldnd1Q9CQX5 Gm44421-201ENSMUST00000205064 1221 ntBASIC12.56□□□□□ -0.4
Cldnd1Q9CQX5 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Cldnd1Q9CQX5 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.56□□□□□ -0.4
Cldnd1Q9CQX5 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC12.56□□□□□ -0.4
Cldnd1Q9CQX5 AC122350.1-201ENSMUST00000228135 533 ntBASIC12.56□□□□□ -0.4
Cldnd1Q9CQX5 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldnd1Q9CQX5 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms