Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tlr3Q99MB1 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tlr3Q99MB1 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tlr3Q99MB1 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.25□□□□□ -0.29
Tlr3Q99MB1 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
Tlr3Q99MB1 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Tlr3Q99MB1 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Tlr3Q99MB1 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Tlr3Q99MB1 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tlr3Q99MB1 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Tlr3Q99MB1 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tlr3Q99MB1 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Tlr3Q99MB1 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tlr3Q99MB1 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tlr3Q99MB1 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Tlr3Q99MB1 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tlr3Q99MB1 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Tlr3Q99MB1 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Tlr3Q99MB1 Gm8038-201ENSMUST00000164674 2044 ntBASIC13.24□□□□□ -0.29
Tlr3Q99MB1 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tlr3Q99MB1 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tlr3Q99MB1 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC13.24□□□□□ -0.29
Tlr3Q99MB1 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tlr3Q99MB1 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC13.24□□□□□ -0.29
Tlr3Q99MB1 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Tlr3Q99MB1 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Tlr3Q99MB1 Gm25043-201ENSMUST00000158604 212 ntBASIC13.24□□□□□ -0.29
Tlr3Q99MB1 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Tlr3Q99MB1 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tlr3Q99MB1 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Tlr3Q99MB1 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Tlr3Q99MB1 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC13.24□□□□□ -0.29
Tlr3Q99MB1 AC126253.1-202ENSMUST00000226732 835 ntBASIC13.24□□□□□ -0.29
Tlr3Q99MB1 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tlr3Q99MB1 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Tlr3Q99MB1 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tlr3Q99MB1 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Tlr3Q99MB1 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tlr3Q99MB1 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tlr3Q99MB1 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Tlr3Q99MB1 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tlr3Q99MB1 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.24□□□□□ -0.29
Tlr3Q99MB1 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tlr3Q99MB1 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tlr3Q99MB1 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Tlr3Q99MB1 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Tlr3Q99MB1 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.23□□□□□ -0.29
Tlr3Q99MB1 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Tlr3Q99MB1 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tlr3Q99MB1 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tlr3Q99MB1 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.23□□□□□ -0.29
Tlr3Q99MB1 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tlr3Q99MB1 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Tlr3Q99MB1 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tlr3Q99MB1 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Tlr3Q99MB1 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Tlr3Q99MB1 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Tlr3Q99MB1 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC13.23□□□□□ -0.29
Tlr3Q99MB1 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tlr3Q99MB1 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Tlr3Q99MB1 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Tlr3Q99MB1 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tlr3Q99MB1 Gm11222-201ENSMUST00000119005 738 ntBASIC13.23□□□□□ -0.29
Tlr3Q99MB1 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC13.23□□□□□ -0.29
Tlr3Q99MB1 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC13.23□□□□□ -0.29
Tlr3Q99MB1 Gm27390-201ENSMUST00000184516 176 ntBASIC13.23□□□□□ -0.29
Tlr3Q99MB1 Gm8176-201ENSMUST00000191297 1099 ntBASIC13.23□□□□□ -0.29
Tlr3Q99MB1 Ighv1-60-201ENSMUST00000195816 405 ntBASIC13.23□□□□□ -0.29
Tlr3Q99MB1 Gm42937-201ENSMUST00000197360 752 ntBASIC13.23□□□□□ -0.29
Tlr3Q99MB1 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.23□□□□□ -0.29
Tlr3Q99MB1 Gm5950-201ENSMUST00000213337 772 ntBASIC13.23□□□□□ -0.29
Tlr3Q99MB1 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tlr3Q99MB1 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC13.23□□□□□ -0.29
Tlr3Q99MB1 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tlr3Q99MB1 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tlr3Q99MB1 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tlr3Q99MB1 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tlr3Q99MB1 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tlr3Q99MB1 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tlr3Q99MB1 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Tlr3Q99MB1 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tlr3Q99MB1 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Tlr3Q99MB1 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tlr3Q99MB1 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tlr3Q99MB1 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Tlr3Q99MB1 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC13.23□□□□□ -0.29
Tlr3Q99MB1 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Tlr3Q99MB1 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tlr3Q99MB1 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.23□□□□□ -0.29
Tlr3Q99MB1 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.23□□□□□ -0.29
Tlr3Q99MB1 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Tlr3Q99MB1 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Tlr3Q99MB1 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC13.23□□□□□ -0.29
Tlr3Q99MB1 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.23□□□□□ -0.29
Tlr3Q99MB1 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tlr3Q99MB1 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC13.22□□□□□ -0.29
Tlr3Q99MB1 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Tlr3Q99MB1 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tlr3Q99MB1 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Tlr3Q99MB1 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms