Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd3Q99LE3 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd3Q99LE3 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Lysmd3Q99LE3 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd3Q99LE3 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd3Q99LE3 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd3Q99LE3 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12.82□□□□□ -0.36
Lysmd3Q99LE3 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.82□□□□□ -0.36
Lysmd3Q99LE3 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.82□□□□□ -0.36
Lysmd3Q99LE3 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.82□□□□□ -0.36
Lysmd3Q99LE3 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd3Q99LE3 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd3Q99LE3 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Lysmd3Q99LE3 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd3Q99LE3 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.82□□□□□ -0.36
Lysmd3Q99LE3 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd3Q99LE3 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd3Q99LE3 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd3Q99LE3 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd3Q99LE3 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Lysmd3Q99LE3 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd3Q99LE3 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd3Q99LE3 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.82□□□□□ -0.36
Lysmd3Q99LE3 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.82□□□□□ -0.36
Lysmd3Q99LE3 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.82□□□□□ -0.36
Lysmd3Q99LE3 Matn2-203ENSMUST00000226766 3252 ntBASIC12.82□□□□□ -0.36
Lysmd3Q99LE3 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd3Q99LE3 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd3Q99LE3 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd3Q99LE3 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd3Q99LE3 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd3Q99LE3 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lysmd3Q99LE3 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lysmd3Q99LE3 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.81□□□□□ -0.36
Lysmd3Q99LE3 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lysmd3Q99LE3 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lysmd3Q99LE3 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lysmd3Q99LE3 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lysmd3Q99LE3 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lysmd3Q99LE3 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.81□□□□□ -0.36
Lysmd3Q99LE3 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.81□□□□□ -0.36
Lysmd3Q99LE3 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.81□□□□□ -0.36
Lysmd3Q99LE3 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Lysmd3Q99LE3 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.81□□□□□ -0.36
Lysmd3Q99LE3 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.81□□□□□ -0.36
Lysmd3Q99LE3 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lysmd3Q99LE3 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.81□□□□□ -0.36
Lysmd3Q99LE3 Gm9996-201ENSMUST00000070359 913 ntBASIC12.81□□□□□ -0.36
Lysmd3Q99LE3 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lysmd3Q99LE3 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lysmd3Q99LE3 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lysmd3Q99LE3 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lysmd3Q99LE3 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lysmd3Q99LE3 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Lysmd3Q99LE3 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lysmd3Q99LE3 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lysmd3Q99LE3 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lysmd3Q99LE3 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.81□□□□□ -0.36
Lysmd3Q99LE3 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.81□□□□□ -0.36
Lysmd3Q99LE3 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lysmd3Q99LE3 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd3Q99LE3 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd3Q99LE3 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.8□□□□□ -0.36
Lysmd3Q99LE3 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd3Q99LE3 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd3Q99LE3 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd3Q99LE3 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.8□□□□□ -0.36
Lysmd3Q99LE3 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd3Q99LE3 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd3Q99LE3 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd3Q99LE3 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd3Q99LE3 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd3Q99LE3 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.8□□□□□ -0.36
Lysmd3Q99LE3 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd3Q99LE3 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd3Q99LE3 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd3Q99LE3 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd3Q99LE3 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd3Q99LE3 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd3Q99LE3 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.8□□□□□ -0.36
Lysmd3Q99LE3 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.8□□□□□ -0.36
Lysmd3Q99LE3 Gm14644-201ENSMUST00000116671 647 ntBASIC12.8□□□□□ -0.36
Lysmd3Q99LE3 Gm13296-201ENSMUST00000117854 997 ntBASIC12.8□□□□□ -0.36
Lysmd3Q99LE3 Gm14017-201ENSMUST00000121934 386 ntBASIC12.8□□□□□ -0.36
Lysmd3Q99LE3 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd3Q99LE3 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd3Q99LE3 Gm2260-201ENSMUST00000184965 657 ntBASIC12.8□□□□□ -0.36
Lysmd3Q99LE3 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.8□□□□□ -0.36
Lysmd3Q99LE3 Gm19187-201ENSMUST00000206781 892 ntBASIC12.8□□□□□ -0.36
Lysmd3Q99LE3 Gm45598-202ENSMUST00000210719 986 ntBASIC12.8□□□□□ -0.36
Lysmd3Q99LE3 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd3Q99LE3 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd3Q99LE3 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Lysmd3Q99LE3 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd3Q99LE3 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd3Q99LE3 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd3Q99LE3 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd3Q99LE3 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Lysmd3Q99LE3 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd3Q99LE3 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms