Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Syne4Q8CII8 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Syne4Q8CII8 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Syne4Q8CII8 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.91□□□□□ -0.18
Syne4Q8CII8 Gm25880-201ENSMUST00000104331 132 ntBASIC13.91□□□□□ -0.18
Syne4Q8CII8 Gm14760-201ENSMUST00000121831 999 ntBASIC13.91□□□□□ -0.18
Syne4Q8CII8 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC13.91□□□□□ -0.18
Syne4Q8CII8 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC13.91□□□□□ -0.18
Syne4Q8CII8 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Syne4Q8CII8 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Syne4Q8CII8 Gm23045-201ENSMUST00000175041 96 ntBASIC13.91□□□□□ -0.18
Syne4Q8CII8 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC13.91□□□□□ -0.18
Syne4Q8CII8 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC13.91□□□□□ -0.18
Syne4Q8CII8 Gm42518-201ENSMUST00000196277 938 ntBASIC13.91□□□□□ -0.18
Syne4Q8CII8 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC13.91□□□□□ -0.18
Syne4Q8CII8 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Syne4Q8CII8 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Syne4Q8CII8 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Syne4Q8CII8 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Syne4Q8CII8 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Syne4Q8CII8 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Syne4Q8CII8 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Syne4Q8CII8 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Syne4Q8CII8 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Syne4Q8CII8 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Syne4Q8CII8 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Syne4Q8CII8 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Syne4Q8CII8 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Syne4Q8CII8 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Syne4Q8CII8 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.91□□□□□ -0.18
Syne4Q8CII8 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Syne4Q8CII8 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Syne4Q8CII8 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Syne4Q8CII8 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Syne4Q8CII8 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Syne4Q8CII8 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Syne4Q8CII8 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Syne4Q8CII8 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Syne4Q8CII8 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Syne4Q8CII8 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Syne4Q8CII8 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
Syne4Q8CII8 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC13.9□□□□□ -0.18
Syne4Q8CII8 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC13.9□□□□□ -0.18
Syne4Q8CII8 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Syne4Q8CII8 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Syne4Q8CII8 Gm4879-201ENSMUST00000122190 1272 ntBASIC13.9□□□□□ -0.18
Syne4Q8CII8 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC13.9□□□□□ -0.18
Syne4Q8CII8 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC13.9□□□□□ -0.18
Syne4Q8CII8 Mir8115-201ENSMUST00000184992 119 ntBASIC13.9□□□□□ -0.18
Syne4Q8CII8 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC13.9□□□□□ -0.18
Syne4Q8CII8 Gm43186-201ENSMUST00000198130 824 ntBASIC13.9□□□□□ -0.18
Syne4Q8CII8 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Syne4Q8CII8 Gm44980-201ENSMUST00000205826 314 ntBASIC13.9□□□□□ -0.18
Syne4Q8CII8 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Syne4Q8CII8 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Syne4Q8CII8 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Syne4Q8CII8 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Syne4Q8CII8 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Syne4Q8CII8 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Syne4Q8CII8 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Syne4Q8CII8 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Syne4Q8CII8 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
Syne4Q8CII8 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Syne4Q8CII8 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Syne4Q8CII8 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Syne4Q8CII8 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Syne4Q8CII8 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Syne4Q8CII8 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Syne4Q8CII8 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Syne4Q8CII8 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Syne4Q8CII8 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Syne4Q8CII8 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.89□□□□□ -0.19
Syne4Q8CII8 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Syne4Q8CII8 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Syne4Q8CII8 Gm18782-201ENSMUST00000209023 1399 ntBASIC13.89□□□□□ -0.19
Syne4Q8CII8 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Syne4Q8CII8 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Syne4Q8CII8 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Syne4Q8CII8 Gm23912-201ENSMUST00000104687 87 ntBASIC13.89□□□□□ -0.19
Syne4Q8CII8 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC13.89□□□□□ -0.19
Syne4Q8CII8 Gm16071-201ENSMUST00000119589 793 ntBASIC13.89□□□□□ -0.19
Syne4Q8CII8 Gm12164-201ENSMUST00000121695 551 ntBASIC13.89□□□□□ -0.19
Syne4Q8CII8 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC13.89□□□□□ -0.19
Syne4Q8CII8 Gm17826-201ENSMUST00000189720 798 ntBASIC13.89□□□□□ -0.19
Syne4Q8CII8 Gm44329-201ENSMUST00000197469 112 ntBASIC13.89□□□□□ -0.19
Syne4Q8CII8 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC13.89□□□□□ -0.19
Syne4Q8CII8 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Syne4Q8CII8 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC13.89□□□□□ -0.19
Syne4Q8CII8 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Syne4Q8CII8 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
Syne4Q8CII8 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Syne4Q8CII8 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Syne4Q8CII8 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Syne4Q8CII8 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Syne4Q8CII8 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Syne4Q8CII8 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.89□□□□□ -0.19
Syne4Q8CII8 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Syne4Q8CII8 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Syne4Q8CII8 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Syne4Q8CII8 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms