Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rdh1Q8CGV4 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Rdh1Q8CGV4 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rdh1Q8CGV4 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rdh1Q8CGV4 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rdh1Q8CGV4 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rdh1Q8CGV4 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rdh1Q8CGV4 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rdh1Q8CGV4 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.98□□□□□ -0.49
Rdh1Q8CGV4 Kcnk16-202ENSMUST00000225596 2127 ntBASIC11.98□□□□□ -0.49
Rdh1Q8CGV4 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rdh1Q8CGV4 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rdh1Q8CGV4 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Rdh1Q8CGV4 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Rdh1Q8CGV4 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rdh1Q8CGV4 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Rdh1Q8CGV4 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rdh1Q8CGV4 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.97□□□□□ -0.49
Rdh1Q8CGV4 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rdh1Q8CGV4 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Rdh1Q8CGV4 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.97□□□□□ -0.49
Rdh1Q8CGV4 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rdh1Q8CGV4 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.97□□□□□ -0.49
Rdh1Q8CGV4 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rdh1Q8CGV4 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rdh1Q8CGV4 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rdh1Q8CGV4 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rdh1Q8CGV4 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rdh1Q8CGV4 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.97□□□□□ -0.49
Rdh1Q8CGV4 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rdh1Q8CGV4 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC11.97□□□□□ -0.49
Rdh1Q8CGV4 Gm12380-201ENSMUST00000119012 544 ntBASIC11.97□□□□□ -0.49
Rdh1Q8CGV4 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Rdh1Q8CGV4 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rdh1Q8CGV4 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.97□□□□□ -0.49
Rdh1Q8CGV4 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rdh1Q8CGV4 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rdh1Q8CGV4 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rdh1Q8CGV4 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rdh1Q8CGV4 Gm25732-201ENSMUST00000175168 60 ntBASIC11.97□□□□□ -0.49
Rdh1Q8CGV4 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC11.97□□□□□ -0.49
Rdh1Q8CGV4 Gm18753-201ENSMUST00000201000 566 ntBASIC11.97□□□□□ -0.49
Rdh1Q8CGV4 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rdh1Q8CGV4 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.97□□□□□ -0.49
Rdh1Q8CGV4 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rdh1Q8CGV4 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rdh1Q8CGV4 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
Rdh1Q8CGV4 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rdh1Q8CGV4 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Rdh1Q8CGV4 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rdh1Q8CGV4 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rdh1Q8CGV4 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.97□□□□□ -0.49
Rdh1Q8CGV4 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rdh1Q8CGV4 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.96□□□□□ -0.49
Rdh1Q8CGV4 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.96□□□□□ -0.49
Rdh1Q8CGV4 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rdh1Q8CGV4 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
Rdh1Q8CGV4 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Rdh1Q8CGV4 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rdh1Q8CGV4 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rdh1Q8CGV4 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rdh1Q8CGV4 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC11.96□□□□□ -0.49
Rdh1Q8CGV4 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rdh1Q8CGV4 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Rdh1Q8CGV4 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.96□□□□□ -0.49
Rdh1Q8CGV4 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rdh1Q8CGV4 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.96□□□□□ -0.49
Rdh1Q8CGV4 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rdh1Q8CGV4 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rdh1Q8CGV4 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rdh1Q8CGV4 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
Rdh1Q8CGV4 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Rdh1Q8CGV4 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Rdh1Q8CGV4 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC11.96□□□□□ -0.49
Rdh1Q8CGV4 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rdh1Q8CGV4 Gm9630-201ENSMUST00000178304 885 ntBASIC11.96□□□□□ -0.49
Rdh1Q8CGV4 Gm44882-201ENSMUST00000205702 802 ntBASIC11.96□□□□□ -0.49
Rdh1Q8CGV4 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rdh1Q8CGV4 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Rdh1Q8CGV4 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Rdh1Q8CGV4 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Rdh1Q8CGV4 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Rdh1Q8CGV4 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Rdh1Q8CGV4 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Rdh1Q8CGV4 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Rdh1Q8CGV4 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Rdh1Q8CGV4 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Rdh1Q8CGV4 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Rdh1Q8CGV4 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.96□□□□□ -0.5
Rdh1Q8CGV4 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Rdh1Q8CGV4 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rdh1Q8CGV4 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rdh1Q8CGV4 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rdh1Q8CGV4 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rdh1Q8CGV4 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rdh1Q8CGV4 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rdh1Q8CGV4 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Rdh1Q8CGV4 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rdh1Q8CGV4 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.95□□□□□ -0.5
Rdh1Q8CGV4 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms