Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Smc5Q8CG46 Gm7809-201ENSMUST00000153199 742 ntBASIC15.21■□□□□ 0.03
Smc5Q8CG46 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Smc5Q8CG46 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC15.21■□□□□ 0.03
Smc5Q8CG46 Gm9136-201ENSMUST00000193368 454 ntBASIC15.21■□□□□ 0.03
Smc5Q8CG46 n-R5s195-201ENSMUST00000082891 119 ntBASIC15.21■□□□□ 0.03
Smc5Q8CG46 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Smc5Q8CG46 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smc5Q8CG46 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC15.21■□□□□ 0.02
Smc5Q8CG46 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Smc5Q8CG46 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
Smc5Q8CG46 Gm2128-201ENSMUST00000108009 2560 ntBASIC15.21■□□□□ 0.02
Smc5Q8CG46 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Smc5Q8CG46 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Smc5Q8CG46 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smc5Q8CG46 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smc5Q8CG46 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smc5Q8CG46 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smc5Q8CG46 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smc5Q8CG46 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Smc5Q8CG46 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC15.2■□□□□ 0.02
Smc5Q8CG46 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smc5Q8CG46 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smc5Q8CG46 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC15.2■□□□□ 0.02
Smc5Q8CG46 Gm25261-201ENSMUST00000157416 134 ntBASIC15.2■□□□□ 0.02
Smc5Q8CG46 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC15.2■□□□□ 0.02
Smc5Q8CG46 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smc5Q8CG46 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smc5Q8CG46 Gm4935-201ENSMUST00000221316 1198 ntBASIC15.2■□□□□ 0.02
Smc5Q8CG46 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smc5Q8CG46 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smc5Q8CG46 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC15.2■□□□□ 0.02
Smc5Q8CG46 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smc5Q8CG46 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smc5Q8CG46 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC15.2■□□□□ 0.02
Smc5Q8CG46 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC15.2■□□□□ 0.02
Smc5Q8CG46 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smc5Q8CG46 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smc5Q8CG46 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Smc5Q8CG46 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Smc5Q8CG46 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smc5Q8CG46 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smc5Q8CG46 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smc5Q8CG46 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC15.2■□□□□ 0.02
Smc5Q8CG46 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Smc5Q8CG46 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smc5Q8CG46 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smc5Q8CG46 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smc5Q8CG46 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smc5Q8CG46 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smc5Q8CG46 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smc5Q8CG46 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smc5Q8CG46 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smc5Q8CG46 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smc5Q8CG46 AC124397.2-201ENSMUST00000225575 2215 ntBASIC15.19■□□□□ 0.02
Smc5Q8CG46 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smc5Q8CG46 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Smc5Q8CG46 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC15.19■□□□□ 0.02
Smc5Q8CG46 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smc5Q8CG46 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC15.19■□□□□ 0.02
Smc5Q8CG46 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC15.19■□□□□ 0.02
Smc5Q8CG46 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smc5Q8CG46 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smc5Q8CG46 Gm6189-201ENSMUST00000164487 2082 ntBASIC15.19■□□□□ 0.02
Smc5Q8CG46 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smc5Q8CG46 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smc5Q8CG46 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Smc5Q8CG46 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smc5Q8CG46 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC15.19■□□□□ 0.02
Smc5Q8CG46 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smc5Q8CG46 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smc5Q8CG46 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smc5Q8CG46 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smc5Q8CG46 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smc5Q8CG46 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smc5Q8CG46 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smc5Q8CG46 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Smc5Q8CG46 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smc5Q8CG46 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smc5Q8CG46 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smc5Q8CG46 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smc5Q8CG46 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC15.18■□□□□ 0.02
Smc5Q8CG46 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smc5Q8CG46 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smc5Q8CG46 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Smc5Q8CG46 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smc5Q8CG46 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC15.18■□□□□ 0.02
Smc5Q8CG46 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Smc5Q8CG46 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC15.18■□□□□ 0.02
Smc5Q8CG46 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smc5Q8CG46 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smc5Q8CG46 Snora73a-201ENSMUST00000082453 205 ntBASIC15.18■□□□□ 0.02
Smc5Q8CG46 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smc5Q8CG46 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smc5Q8CG46 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Smc5Q8CG46 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smc5Q8CG46 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Smc5Q8CG46 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smc5Q8CG46 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smc5Q8CG46 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms