Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Gm10076-201ENSMUST00000073238 384 ntBASIC11.49□□□□□ -0.57
Pif1Q80SX8 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pif1Q80SX8 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pif1Q80SX8 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pif1Q80SX8 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pif1Q80SX8 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pif1Q80SX8 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pif1Q80SX8 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Pif1Q80SX8 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pif1Q80SX8 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pif1Q80SX8 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pif1Q80SX8 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pif1Q80SX8 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pif1Q80SX8 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.49□□□□□ -0.57
Pif1Q80SX8 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pif1Q80SX8 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.49□□□□□ -0.57
Pif1Q80SX8 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.49□□□□□ -0.57
Pif1Q80SX8 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Pif1Q80SX8 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pif1Q80SX8 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pif1Q80SX8 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pif1Q80SX8 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.48□□□□□ -0.57
Pif1Q80SX8 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pif1Q80SX8 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pif1Q80SX8 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pif1Q80SX8 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pif1Q80SX8 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pif1Q80SX8 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pif1Q80SX8 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pif1Q80SX8 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Pif1Q80SX8 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pif1Q80SX8 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Pif1Q80SX8 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Pif1Q80SX8 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pif1Q80SX8 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Pif1Q80SX8 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Pif1Q80SX8 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.48□□□□□ -0.57
Pif1Q80SX8 Gm12015-201ENSMUST00000117065 843 ntBASIC11.48□□□□□ -0.57
Pif1Q80SX8 Gm13813-201ENSMUST00000120998 787 ntBASIC11.48□□□□□ -0.57
Pif1Q80SX8 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pif1Q80SX8 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pif1Q80SX8 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC11.48□□□□□ -0.57
Pif1Q80SX8 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pif1Q80SX8 Gm20426-201ENSMUST00000173657 440 ntBASIC11.48□□□□□ -0.57
Pif1Q80SX8 Gm24514-201ENSMUST00000174961 285 ntBASIC11.48□□□□□ -0.57
Pif1Q80SX8 Gm27552-201ENSMUST00000183351 62 ntBASIC11.48□□□□□ -0.57
Pif1Q80SX8 Gm27844-201ENSMUST00000183613 62 ntBASIC11.48□□□□□ -0.57
Pif1Q80SX8 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Pif1Q80SX8 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC11.48□□□□□ -0.57
Pif1Q80SX8 Ighv5-7-201ENSMUST00000192302 244 ntBASIC11.48□□□□□ -0.57
Pif1Q80SX8 Gm7003-201ENSMUST00000195089 312 ntBASIC11.48□□□□□ -0.57
Pif1Q80SX8 Gm17812-201ENSMUST00000204935 318 ntBASIC11.48□□□□□ -0.57
Pif1Q80SX8 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.48□□□□□ -0.57
Pif1Q80SX8 Gm18730-201ENSMUST00000218038 343 ntBASIC11.48□□□□□ -0.57
Pif1Q80SX8 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pif1Q80SX8 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pif1Q80SX8 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pif1Q80SX8 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Pif1Q80SX8 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pif1Q80SX8 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pif1Q80SX8 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pif1Q80SX8 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pif1Q80SX8 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pif1Q80SX8 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pif1Q80SX8 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pif1Q80SX8 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pif1Q80SX8 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pif1Q80SX8 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.48□□□□□ -0.57
Pif1Q80SX8 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pif1Q80SX8 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pif1Q80SX8 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.47□□□□□ -0.57
Pif1Q80SX8 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pif1Q80SX8 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pif1Q80SX8 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
Pif1Q80SX8 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pif1Q80SX8 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pif1Q80SX8 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pif1Q80SX8 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Pif1Q80SX8 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pif1Q80SX8 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.47□□□□□ -0.57
Pif1Q80SX8 Gm19445-201ENSMUST00000193649 2438 ntBASIC11.47□□□□□ -0.57
Pif1Q80SX8 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pif1Q80SX8 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.47□□□□□ -0.57
Pif1Q80SX8 Apobec1-203ENSMUST00000112587 2072 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Pif1Q80SX8 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pif1Q80SX8 1700019C18Rik-203ENSMUST00000222085 1766 ntTSL 5 BASIC11.47□□□□□ -0.57
Pif1Q80SX8 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pif1Q80SX8 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pif1Q80SX8 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pif1Q80SX8 Gm12266-201ENSMUST00000120311 962 ntBASIC11.47□□□□□ -0.57
Pif1Q80SX8 Gm13315-201ENSMUST00000120376 991 ntBASIC11.47□□□□□ -0.57
Pif1Q80SX8 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Pif1Q80SX8 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.47□□□□□ -0.57
Pif1Q80SX8 Gm5523-201ENSMUST00000180415 997 ntBASIC11.47□□□□□ -0.57
Pif1Q80SX8 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pif1Q80SX8 Gm43084-201ENSMUST00000200696 947 ntBASIC11.47□□□□□ -0.57
Pif1Q80SX8 Gm44136-201ENSMUST00000203819 1106 ntBASIC11.47□□□□□ -0.57
Pif1Q80SX8 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.47□□□□□ -0.57
Pif1Q80SX8 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pif1Q80SX8 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms