Protein–RNA interactions for Protein: Q6UX27

VSTM1, V-set and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1Q6UX27 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VSTM1Q6UX27 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
VSTM1Q6UX27 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VSTM1Q6UX27 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VSTM1Q6UX27 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
VSTM1Q6UX27 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
VSTM1Q6UX27 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VSTM1Q6UX27 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VSTM1Q6UX27 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VSTM1Q6UX27 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VSTM1Q6UX27 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
VSTM1Q6UX27 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.4■□□□□ 0.22
VSTM1Q6UX27 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.4■□□□□ 0.22
VSTM1Q6UX27 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.4■□□□□ 0.22
VSTM1Q6UX27 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
VSTM1Q6UX27 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VSTM1Q6UX27 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.4■□□□□ 0.22
VSTM1Q6UX27 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
VSTM1Q6UX27 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VSTM1Q6UX27 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VSTM1Q6UX27 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VSTM1Q6UX27 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
VSTM1Q6UX27 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.4■□□□□ 0.22
VSTM1Q6UX27 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
VSTM1Q6UX27 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
VSTM1Q6UX27 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VSTM1Q6UX27 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
VSTM1Q6UX27 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.4■□□□□ 0.22
VSTM1Q6UX27 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
VSTM1Q6UX27 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC16.4■□□□□ 0.22
VSTM1Q6UX27 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC16.4■□□□□ 0.22
VSTM1Q6UX27 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.4■□□□□ 0.22
VSTM1Q6UX27 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.4■□□□□ 0.22
VSTM1Q6UX27 USP32P1-208ENST00000506594 1164 ntBASIC16.4■□□□□ 0.22
VSTM1Q6UX27 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.4■□□□□ 0.22
VSTM1Q6UX27 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC16.4■□□□□ 0.22
VSTM1Q6UX27 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.4■□□□□ 0.22
VSTM1Q6UX27 KRT17P8-201ENST00000540749 863 ntBASIC16.4■□□□□ 0.22
VSTM1Q6UX27 PTP4A1P2-201ENST00000546033 454 ntBASIC16.4■□□□□ 0.22
VSTM1Q6UX27 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.4■□□□□ 0.22
VSTM1Q6UX27 AP001063.1-201ENST00000568332 529 ntBASIC16.4■□□□□ 0.22
VSTM1Q6UX27 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VSTM1Q6UX27 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC16.4■□□□□ 0.22
VSTM1Q6UX27 BTNL10-201ENST00000595971 695 ntBASIC16.4■□□□□ 0.22
VSTM1Q6UX27 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC16.4■□□□□ 0.22
VSTM1Q6UX27 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.4■□□□□ 0.22
VSTM1Q6UX27 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
VSTM1Q6UX27 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
VSTM1Q6UX27 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
VSTM1Q6UX27 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
VSTM1Q6UX27 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
VSTM1Q6UX27 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VSTM1Q6UX27 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.4■□□□□ 0.22
VSTM1Q6UX27 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
VSTM1Q6UX27 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
VSTM1Q6UX27 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
VSTM1Q6UX27 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
VSTM1Q6UX27 AC127383.1-201ENST00000444697 1800 ntBASIC16.4■□□□□ 0.22
VSTM1Q6UX27 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
VSTM1Q6UX27 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
VSTM1Q6UX27 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
VSTM1Q6UX27 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VSTM1Q6UX27 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VSTM1Q6UX27 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
VSTM1Q6UX27 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
VSTM1Q6UX27 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VSTM1Q6UX27 TCAF2P1-201ENST00000291129 2421 ntBASIC16.39■□□□□ 0.21
VSTM1Q6UX27 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VSTM1Q6UX27 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VSTM1Q6UX27 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VSTM1Q6UX27 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VSTM1Q6UX27 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VSTM1Q6UX27 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VSTM1Q6UX27 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
VSTM1Q6UX27 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
VSTM1Q6UX27 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
VSTM1Q6UX27 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VSTM1Q6UX27 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
VSTM1Q6UX27 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
VSTM1Q6UX27 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VSTM1Q6UX27 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VSTM1Q6UX27 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
VSTM1Q6UX27 AC079776.1-201ENST00000401540 1152 ntBASIC16.39■□□□□ 0.21
VSTM1Q6UX27 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.39■□□□□ 0.21
VSTM1Q6UX27 ARSEP1-201ENST00000420443 635 ntBASIC16.39■□□□□ 0.21
VSTM1Q6UX27 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.39■□□□□ 0.21
VSTM1Q6UX27 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.39■□□□□ 0.21
VSTM1Q6UX27 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.39■□□□□ 0.21
VSTM1Q6UX27 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.39■□□□□ 0.21
VSTM1Q6UX27 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.39■□□□□ 0.21
VSTM1Q6UX27 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VSTM1Q6UX27 TDH-203ENST00000531764 1110 ntBASIC16.39■□□□□ 0.21
VSTM1Q6UX27 NOP2-220ENST00000545915 630 ntTSL 2 BASIC16.39■□□□□ 0.21
VSTM1Q6UX27 RAB43P1-201ENST00000561790 589 ntBASIC16.39■□□□□ 0.21
VSTM1Q6UX27 CLUHP6-201ENST00000580789 941 ntBASIC16.39■□□□□ 0.21
VSTM1Q6UX27 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.39■□□□□ 0.21
VSTM1Q6UX27 AC233724.13-201ENST00000598383 410 ntBASIC16.39■□□□□ 0.21
VSTM1Q6UX27 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.39■□□□□ 0.21
VSTM1Q6UX27 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.39■□□□□ 0.21
VSTM1Q6UX27 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms